RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 NDUFA7O95182 113 aa12.82□□□□□ -0.36
LINC01225-201ENST00000562271 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
LINC01225-201ENST00000562271 FHL3Q13643 280 aa12.82□□□□□ -0.36
LINC01225-201ENST00000562271 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
LINC01225-201ENST00000562271 KIR2DL4Q99706 377 aa12.82□□□□□ -0.36
LINC01225-201ENST00000562271 TP53TG1Q9Y2A0 90 aa12.82□□□□□ -0.36
LINC01225-201ENST00000562271 A0A087WWL8 130 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 F5H697 171 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 VCYO14598 125 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 ELANEP08246 267 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 ZFP2Q6ZN57 461 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 CRYGDP07320 174 aa12.81□□□□□ -0.36
LINC01225-201ENST00000562271 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
LINC01225-201ENST00000562271 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
LINC01225-201ENST00000562271 MORN3Q6PF18 240 aaPredicted RBP12.8□□□□□ -0.36
LINC01225-201ENST00000562271 RAX2Q96IS3 184 aa12.8□□□□□ -0.36
LINC01225-201ENST00000562271 IGIPA6NJ69 53 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 TSHBP01222 138 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 PAPPA-AS1Q5QFB9 102 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 SHISA2Q6UWI4 295 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 RNF152Q8N8N0 203 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
LINC01225-201ENST00000562271 TEN1Q86WV5 123 aa12.79□□□□□ -0.36
LINC01225-201ENST00000562271 SDHAF1A6NFY7 115 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
LINC01225-201ENST00000562271 SCGB1D4Q6XE38 83 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 UBE2E2Q96LR5 201 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 LGALS9O00182 355 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 PMVKQ15126 192 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 LYRM7Q5U5X0 104 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 TMEM141Q96I45 108 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 SPANXA1Q9NS26 97 aa12.78□□□□□ -0.36
LINC01225-201ENST00000562271 IGHV3-16A0A0C4DH30 117 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 A0A0J9YX75 114 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 C11orf86A6NJI1 115 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 B5MCH6 92 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 C9orf85Q96MD7 179 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 TIMM17AQ99595 171 aa12.77□□□□□ -0.36
LINC01225-201ENST00000562271 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.37
LINC01225-201ENST00000562271 HERVK_113P61574 105 aa12.77□□□□□ -0.37
LINC01225-201ENST00000562271 RPL39P62891 51 aaKnown RBP12.77□□□□□ -0.37
LINC01225-201ENST00000562271 MDFIQ99750 246 aa12.77□□□□□ -0.37
LINC01225-201ENST00000562271 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 TRBV6-5A0A0K0K1A5 114 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 CITED1Q99966 193 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
LINC01225-201ENST00000562271 ANK2Q01484 3957 aa12.75□□□□□ -0.37
LINC01225-201ENST00000562271 EMP1P54849 157 aa12.75□□□□□ -0.37
LINC01225-201ENST00000562271 SBSPONQ8IVN8 264 aa12.75□□□□□ -0.37
LINC01225-201ENST00000562271 PLEKHB2Q96CS7 222 aa12.75□□□□□ -0.37
LINC01225-201ENST00000562271 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
LINC01225-201ENST00000562271 K7EQG2 157 aa12.74□□□□□ -0.37
LINC01225-201ENST00000562271 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
LINC01225-201ENST00000562271 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC01225-201ENST00000562271 Q8N1Y9 231 aa12.74□□□□□ -0.37
LINC01225-201ENST00000562271 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
LINC01225-201ENST00000562271 HERV-K104P63124 156 aa12.74□□□□□ -0.37
LINC01225-201ENST00000562271 ZNF56Q15929 161 aa12.74□□□□□ -0.37
LINC01225-201ENST00000562271 RHODO00212 210 aa12.73□□□□□ -0.37
LINC01225-201ENST00000562271 UBE2D3P61077 147 aa12.73□□□□□ -0.37
LINC01225-201ENST00000562271 UBE2D2P62837 147 aa12.73□□□□□ -0.37
LINC01225-201ENST00000562271 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
LINC01225-201ENST00000562271 IGHV1OR15-1A0A075B7D0 117 aa12.73□□□□□ -0.37
LINC01225-201ENST00000562271 M0QY20 66 aa12.73□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE12JA6NER3 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE7O76087 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 GAGE4Q13068 117 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 SPINK13Q1W4C9 94 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 CCL24O00175 119 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 ZNF876PQ49A33 203 aa12.72□□□□□ -0.37
LINC01225-201ENST00000562271 UBE2D1P51668 147 aa12.71□□□□□ -0.37
LINC01225-201ENST00000562271 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
LINC01225-201ENST00000562271 PSMB2P49721 201 aa12.71□□□□□ -0.38
LINC01225-201ENST00000562271 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.38
LINC01225-201ENST00000562271 A0A0J9YY99 117 aa12.7□□□□□ -0.38
LINC01225-201ENST00000562271 RHOHQ15669 191 aa12.7□□□□□ -0.38
LINC01225-201ENST00000562271 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
LINC01225-201ENST00000562271 A8MWV9 139 aa12.69□□□□□ -0.38
LINC01225-201ENST00000562271 M0QXV9 152 aa12.69□□□□□ -0.38
LINC01225-201ENST00000562271 Q6Q795 121 aa12.69□□□□□ -0.38
LINC01225-201ENST00000562271 NDUFV3P56181 108 aaKnown RBP12.69□□□□□ -0.38
LINC01225-201ENST00000562271 GAGE2BQ13066 116 aa12.68□□□□□ -0.38
LINC01225-201ENST00000562271 GAGE2EQ4V326 116 aa12.68□□□□□ -0.38
LINC01225-201ENST00000562271 PTH2Q96A98 100 aa12.68□□□□□ -0.38
LINC01225-201ENST00000562271 GAGE2DQ9UEU5 116 aa12.68□□□□□ -0.38
LINC01225-201ENST00000562271 TNFRSF18Q9Y5U5 241 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms