RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 FAM231AP0DMU4 169 aa16.33■□□□□ 0.2
TMEM249-201ENST00000561638 FAM231CP0DMU5 169 aa16.33■□□□□ 0.2
TMEM249-201ENST00000561638 GYPEP15421 78 aa16.33■□□□□ 0.2
TMEM249-201ENST00000561638 VAMP3Q15836 100 aa16.33■□□□□ 0.2
TMEM249-201ENST00000561638 MRPL51Q4U2R6 128 aaKnown RBP16.33■□□□□ 0.2
TMEM249-201ENST00000561638 KLK5Q9Y337 293 aaPredicted RBP16.33■□□□□ 0.2
TMEM249-201ENST00000561638 CKS2P33552 79 aa16.32■□□□□ 0.2
TMEM249-201ENST00000561638 NCR2O95944 276 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 APCSP02743 223 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 AMTP48728 403 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 TRBV10-1A0A0K0K1A3 114 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 LOC100131303A0A0U1RQF7 123 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 OCIAD2Q56VL3 154 aa16.31■□□□□ 0.2
TMEM249-201ENST00000561638 D6R8Y8 96 aa16.3■□□□□ 0.2
TMEM249-201ENST00000561638 SMKR1H3BMG3 65 aa16.3■□□□□ 0.2
TMEM249-201ENST00000561638 NUDT3O95989 172 aa16.3■□□□□ 0.2
TMEM249-201ENST00000561638 GAGE12JA6NER3 117 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 H3BNG1 76 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 NUPR1O60356 82 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 GAGE4Q13068 117 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 GAGE5Q13069 117 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 GAGE13Q4V321 117 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 CST9LQ9H4G1 147 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 Q9UF83 564 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 ICOSQ9Y6W8 199 aa16.29■□□□□ 0.2
TMEM249-201ENST00000561638 RPL36AP83881 106 aaKnown RBP16.28■□□□□ 0.2
TMEM249-201ENST00000561638 ORMDL3Q8N138 153 aa16.28■□□□□ 0.2
TMEM249-201ENST00000561638 RPL36ALQ969Q0 106 aaKnown RBP16.28■□□□□ 0.2
TMEM249-201ENST00000561638 TNFRSF18Q9Y5U5 241 aa16.28■□□□□ 0.2
TMEM249-201ENST00000561638 TRAV9-2A0A087WT02 112 aa16.28■□□□□ 0.2
TMEM249-201ENST00000561638 TMEM238LA0A1B0GVL6 79 aa16.28■□□□□ 0.2
TMEM249-201ENST00000561638 SRIP30626 198 aa16.28■□□□□ 0.2
TMEM249-201ENST00000561638 RPL39LQ96EH5 51 aaKnown RBP16.28■□□□□ 0.2
TMEM249-201ENST00000561638 GAS8-AS1O95177 125 aa16.27■□□□□ 0.2
TMEM249-201ENST00000561638 MRPL23Q16540 153 aaKnown RBP16.27■□□□□ 0.2
TMEM249-201ENST00000561638 C15orf53Q8NAA6 179 aa16.27■□□□□ 0.2
TMEM249-201ENST00000561638 NEXN-AS1Q8NBZ9 246 aa16.27■□□□□ 0.2
TMEM249-201ENST00000561638 ZNRF2Q8NHG8 242 aa16.27■□□□□ 0.2
TMEM249-201ENST00000561638 TRBV7-3A0A075B6L6 115 aa16.26■□□□□ 0.19
TMEM249-201ENST00000561638 KIAA1644Q3SXP7 199 aa16.26■□□□□ 0.19
TMEM249-201ENST00000561638 PPP1R17O96001 155 aa16.26■□□□□ 0.19
TMEM249-201ENST00000561638 NIT1Q86X76 327 aa16.26■□□□□ 0.19
TMEM249-201ENST00000561638 A0A096LPF7 62 aa16.25■□□□□ 0.19
TMEM249-201ENST00000561638 TMEM238C9JI98 176 aa16.25■□□□□ 0.19
TMEM249-201ENST00000561638 HINT1P49773 126 aaPredicted RBP16.25■□□□□ 0.19
TMEM249-201ENST00000561638 Q8N976 141 aa16.25■□□□□ 0.19
TMEM249-201ENST00000561638 DNAJC30Q96LL9 226 aa16.25■□□□□ 0.19
TMEM249-201ENST00000561638 PRELID3AQ96N28 172 aa16.24■□□□□ 0.19
TMEM249-201ENST00000561638 ST20Q9HBF5 79 aa16.24■□□□□ 0.19
TMEM249-201ENST00000561638 LINC00310P59036 64 aa16.23■□□□□ 0.19
TMEM249-201ENST00000561638 DNAH7Q8WXX0 4024 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 C3orf84H3BNL1 204 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 TNFRSF6BO95407 300 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 NEGR1Q7Z3B1 354 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 SH2D6Q7Z4S9 175 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 NRACQ8N912 160 aa16.22■□□□□ 0.19
TMEM249-201ENST00000561638 NPYP01303 97 aa16.21■□□□□ 0.18
TMEM249-201ENST00000561638 SCGB1A1P11684 91 aa16.21■□□□□ 0.18
TMEM249-201ENST00000561638 ATP6V0E2Q8NHE4 81 aa16.21■□□□□ 0.18
TMEM249-201ENST00000561638 SDHAF1A6NFY7 115 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 C3orf79P0CE67 100 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 UBE2D3P61077 147 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 UBE2D2P62837 147 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 GTF2H5Q6ZYL4 71 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 PMCHL2Q9BQD1 86 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 CSMD3Q7Z407 3707 aa16.2■□□□□ 0.18
TMEM249-201ENST00000561638 PMCHP20382 165 aa16.19■□□□□ 0.18
TMEM249-201ENST00000561638 TCTAP57738 103 aa16.19■□□□□ 0.18
TMEM249-201ENST00000561638 SUMO2P61956 95 aaKnown RBP16.19■□□□□ 0.18
TMEM249-201ENST00000561638 CASC10Q5T4H9 136 aa16.19■□□□□ 0.18
TMEM249-201ENST00000561638 IGHV3-38A0A0C4DH36 116 aa16.18■□□□□ 0.18
TMEM249-201ENST00000561638 TRBV6-5A0A0K0K1A5 114 aa16.18■□□□□ 0.18
TMEM249-201ENST00000561638 LINC00694P0DN24 101 aa16.18■□□□□ 0.18
TMEM249-201ENST00000561638 DAZ4Q86SG3 579 aaKnown RBP16.18■□□□□ 0.18
TMEM249-201ENST00000561638 DAZ3Q9NR90 486 aaKnown RBP16.18■□□□□ 0.18
TMEM249-201ENST00000561638 APLNQ9ULZ1 77 aa16.18■□□□□ 0.18
TMEM249-201ENST00000561638 C20orf78Q9BR46 151 aa16.17■□□□□ 0.18
TMEM249-201ENST00000561638 TMEM70Q9BUB7 260 aa16.16■□□□□ 0.18
TMEM249-201ENST00000561638 HSBP1O75506 76 aa16.15■□□□□ 0.18
TMEM249-201ENST00000561638 MAP1LC3AQ9H492 121 aa16.15■□□□□ 0.18
TMEM249-201ENST00000561638 GTSF1LQ9H1H1 148 aa16.15■□□□□ 0.18
TMEM249-201ENST00000561638 LOC389332A0A1B0GUA5 103 aa16.14■□□□□ 0.17
TMEM249-201ENST00000561638 DEFB104AQ8WTQ1 72 aa16.14■□□□□ 0.17
TMEM249-201ENST00000561638 TENM2Q9NT68 2774 aa16.13■□□□□ 0.17
TMEM249-201ENST00000561638 I3L3M4 83 aa16.13■□□□□ 0.17
TMEM249-201ENST00000561638 VCYO14598 125 aa16.13■□□□□ 0.17
TMEM249-201ENST00000561638 CCL18P55774 89 aa16.13■□□□□ 0.17
TMEM249-201ENST00000561638 SMIM2Q9BVW6 85 aa16.13■□□□□ 0.17
TMEM249-201ENST00000561638 POLR2KP53803 58 aaKnown RBP16.12■□□□□ 0.17
TMEM249-201ENST00000561638 SLC25A34Q6PIV7 304 aa16.12■□□□□ 0.17
TMEM249-201ENST00000561638 LYPD5Q6UWN5 251 aa16.12■□□□□ 0.17
TMEM249-201ENST00000561638 KIR2DL4Q99706 377 aa16.12■□□□□ 0.17
TMEM249-201ENST00000561638 TRBV27A0A0K0K1C4 114 aa16.11■□□□□ 0.17
TMEM249-201ENST00000561638 SEC11AP67812 179 aa16.11■□□□□ 0.17
TMEM249-201ENST00000561638 ESRGQ1W209 222 aa16.1■□□□□ 0.17
TMEM249-201ENST00000561638 STARD9Q9P2P6 4700 aa16.1■□□□□ 0.17
TMEM249-201ENST00000561638 FCER1GP30273 86 aa16.1■□□□□ 0.17
TMEM249-201ENST00000561638 UBE2DNLQ8IWF7 75 aa16.1■□□□□ 0.17
TMEM249-201ENST00000561638 TAX1BP3O14907 124 aa16.09■□□□□ 0.17
TMEM249-201ENST00000561638 TMEM97Q5BJF2 176 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms