RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	KRTAP26-1	Q6PEX3	210 aa		11.2	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	FAM231D	Q6ZW35	169 aa		11.2	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	LINC00528	Q8N1L1	170 aa		11.2	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	GATD1	Q8NB37	220 aa		11.2	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	IGLV4-60	A0A075B6I1	120 aa		11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	AMT	P48728	403 aa		11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	FOXA3	P55318	350 aa	Predicted RBP	11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	COTL1	Q14019	142 aa		11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	RPL39L	Q96EH5	51 aa	Known RBP	11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	SMIM7	Q9BQ49	75 aa		11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	EIF5A2	Q9GZV4	153 aa	Known RBP	11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	GFRA4	Q9GZZ7	299 aa		11.19	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	PRSS1	P07477	247 aa		11.18	□□□□□ -0.62
CDC42BPB-208	ENST00000561271		A8MWL6	223 aa		11.17	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	UBE2L6	O14933	153 aa		11.17	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	SMIM15	Q7Z3B0	74 aa		11.17	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	FAM210A	Q96ND0	272 aa		11.17	□□□□□ -0.62
CDC42BPB-208	ENST00000561271		A0A1B0GUV1	79 aa		11.16	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	CT83	Q5H943	113 aa		11.16	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	LINC01551	Q86U37	167 aa		11.16	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	HERC1	Q15751	4861 aa		11.16	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	ZNF727	A8MUV8	499 aa		11.15	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	SRP19	P09132	144 aa	Known RBP	11.15	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	CHAC1	Q9BUX1	264 aa		11.15	□□□□□ -0.62
CDC42BPB-208	ENST00000561271	PLA2G1B	P04054	148 aa	Known RBP	11.14	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	CIRBP-AS1	Q8TBR5	109 aa		11.14	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	BORCS7	Q96B45	105 aa		11.13	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	TRAV8-4	A0A0B4J246	113 aa		11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	SDHAF1	A6NFY7	115 aa		11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	HIGD1C	A8MV81	97 aa		11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	NDUFS6	O75380	124 aa	Known RBP	11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	APCS	P02743	223 aa		11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	TSKU	Q8WUA8	353 aa		11.12	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	IGKV3OR2-268	A0A0C4DH90	116 aa		11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	GAS8-AS1	O95177	125 aa		11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	TEX261	Q6UWH6	196 aa		11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	OSTC	Q9NRP0	149 aa		11.11	□□□□□ -0.63
CDC42BPB-208	ENST00000561271		A0A1B0GUT8	65 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	hDV102S1	A0JD36	115 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	NCR2	O95944	276 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	AMMECR1L	Q6DCA0	310 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	DGAT2L7P	Q6IED9	249 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	C9orf163	Q8N9P6	203 aa		11.1	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	RNASEK	Q6P5S7	137 aa	Known RBP	11.09	□□□□□ -0.63
CDC42BPB-208	ENST00000561271		V9GYV3	84 aa		11.09	□□□□□ -0.63
CDC42BPB-208	ENST00000561271	CLRN3	Q8NCR9	226 aa		11.08	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	ISOC2	Q96AB3	205 aa		11.08	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	RNF185	Q96GF1	192 aa		11.08	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	TMEM191A	Q9H0A3	160 aa		11.08	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	TRBV6-5	A0A0K0K1A5	114 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	GAGE12H	A6NDE8	117 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271		C9JQL5	133 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271		I3L3M4	83 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	FGF6	P10767	208 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	RPS10	P46783	165 aa	Known RBP	11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	AMN1	Q8IY45	258 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	TMEM242	Q9NWH2	141 aa		11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.07	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	FAM231B	A6NCW3	169 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	PANO1	I0J062	215 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	TSHB	P01222	138 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	PMCH	P20382	165 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	KRTAP10-4	P60372	401 aa	Predicted RBP	11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	CNBP	P62633	177 aa	Known RBP	11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	RPL23	P62829	140 aa	Known RBP	11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	ADIRF	Q15847	76 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	ST20	Q9HBF5	79 aa		11.06	□□□□□ -0.64
CDC42BPB-208	ENST00000561271		H7C423	109 aa		11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	SRSF3	P84103	164 aa	Known RBP	11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	TMEM241	Q24JQ0	296 aa		11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	C15orf56	Q8N910	161 aa		11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	NUP35	Q8NFH5	326 aa		11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	PKHD1L1	Q86WI1	4243 aa		11.05	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	SMKR1	H3BMG3	65 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	SLPI	P03973	132 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	RAB4A	P20338	218 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	FAM74A3	Q4VXF1	159 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	MRAP2	Q96G30	205 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	AP5S1	Q9NUS5	200 aa		11.04	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	ESD	P10768	282 aa		11.03	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	ZNF25	P17030	456 aa	Predicted RBP	11.03	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	RIG	Q13278	110 aa		11.03	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	SDIM1	Q6ZPB5	146 aa		11.03	□□□□□ -0.64
CDC42BPB-208	ENST00000561271	NAT8	Q9UHE5	227 aa		11.03	□□□□□ -0.64
CDC42BPB-208	ENST00000561271		J3QL48	77 aa		11.02	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	HIGD2B	Q4VC39	106 aa		11.02	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	NAT8B	Q9UHF3	227 aa		11.02	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	IGHV3-64	A0A075B6Q5	118 aa		11.01	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.01	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	POLR2K	P53803	58 aa	Known RBP	11.01	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	BTF3L4	Q96K17	158 aa		11.01	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	TRBV27	A0A0K0K1C4	114 aa		11	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	CHTF8	P0CG12	524 aa		11	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	RPL37A	P61513	92 aa	Known RBP	11	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	PEA15	Q15121	130 aa		11	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	NRAC	Q8N912	160 aa		11	□□□□□ -0.65
CDC42BPB-208	ENST00000561271	OR5A1	Q8NGJ0	315 aa		11	□□□□□ -0.65

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