RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SH2D6Q7Z4S9 175 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TRAPPC1Q9Y5R8 145 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 A0A096LPF7 62 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 F5H697 171 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 TNFRSF6BO95407 300 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 NPYP01303 97 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 TRGC2P03986 189 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 MGPP08493 103 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 GYPEP15421 78 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 SUMO2P61956 95 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 Q0VG73 95 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 ZNF56Q15929 161 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 MRPL23Q16540 153 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 GAGE13Q4V321 117 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 COA6Q5JTJ3 125 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 DAZ4Q86SG3 579 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 C15orf53Q8NAA6 179 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 PRELID3AQ96N28 172 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 TMEM70Q9BUB7 260 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
ZEB1-220ENST00000560909 DAZ3Q9NR90 486 aaKnown RBP3.78□□□□□ -1.8
ZEB1-220ENST00000560909 KMT2CQ8NEZ4 4911 aaKnown RBP3.77□□□□□ -1.81
ZEB1-220ENST00000560909 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 LOC100131303A0A0U1RQF7 123 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 NUPR2A6NF83 97 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 SMKR1H3BMG3 65 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 K7EMI3 77 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 VCYO14598 125 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 NCR2O95944 276 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
ZEB1-220ENST00000560909 OR10J3Q5JRS4 329 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 Q8N8P6 123 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 C18orf32Q8TCD1 76 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 RPL36ALQ969Q0 106 aaKnown RBP3.77□□□□□ -1.81
ZEB1-220ENST00000560909 URB1-AS1Q96HZ7 61 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 GTSF1LQ9H1H1 148 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 ST20Q9HBF5 79 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 ICOSQ9Y6W8 199 aa3.77□□□□□ -1.81
ZEB1-220ENST00000560909 ALMS1Q8TCU4 4167 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 A0A0J9YY99 117 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 C3orf84H3BNL1 204 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 TCAPO15273 167 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 TSHBP01222 138 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BJP06899 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 ESDP10768 282 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HTN3P15516 51 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BOP23527 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 SRIP30626 198 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BBP33778 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BDP58876 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BCP62807 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST2H2BEQ16778 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 IQCJQ1A5X6 159 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.76□□□□□ -1.81
ZEB1-220ENST00000560909 LYPD5Q6UWN5 251 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 NTM-AS1Q6ZSK4 140 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 NEGR1Q7Z3B1 354 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 ATP6V0E2Q8NHE4 81 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BHQ93079 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BNQ99877 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 HIST1H2BMQ99879 126 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 SMIM2Q9BVW6 85 aa3.76□□□□□ -1.81
ZEB1-220ENST00000560909 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
ZEB1-220ENST00000560909 KLK5Q9Y337 293 aaPredicted RBP3.76□□□□□ -1.81
ZEB1-220ENST00000560909 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 GAGE12JA6NER3 117 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 IGLL5B9A064 214 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 I3L3M4 83 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 GAGE1Q13065 139 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 GAGE4Q13068 117 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 GAGE5Q13069 117 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 ESRGQ1W209 222 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 LELP1Q5T871 98 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 UPK3BQ9BT76 320 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 MAP1LC3AQ9H492 121 aa3.75□□□□□ -1.81
ZEB1-220ENST00000560909 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 H7C423 109 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 LINC00614P0C842 121 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 PMCHP20382 165 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 IFI27P40305 119 aaPredicted RBP3.74□□□□□ -1.81
ZEB1-220ENST00000560909 RAB5BP61020 215 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 COTL1Q14019 142 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 CASC10Q5T4H9 136 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 NIT1Q86X76 327 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 C20orf203Q8NBC4 194 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 CHCHD1Q96BP2 118 aaKnown RBP3.74□□□□□ -1.81
ZEB1-220ENST00000560909 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
ZEB1-220ENST00000560909 TIMM21Q9BVV7 248 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms