RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 GAGE4Q13068 117 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 GAGE5Q13069 117 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 JOSD1Q15040 202 aaPredicted RBP7.9□□□□□ -1.14
SNX1-212ENST00000560861 GAGE13Q4V321 117 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 PYY3Q5JQD4 70 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 RPL36ALQ969Q0 106 aaKnown RBP7.9□□□□□ -1.14
SNX1-212ENST00000560861 TOMM6Q96B49 74 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 KIR2DL4Q99706 377 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 NUDT3O95989 172 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 DAZ4Q86SG3 579 aaKnown RBP7.89□□□□□ -1.15
SNX1-212ENST00000560861 C20orf203Q8NBC4 194 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 DEFB104AQ8WTQ1 72 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 CHCHD7Q9BUK0 85 aa7.89□□□□□ -1.15
SNX1-212ENST00000560861 DAZ3Q9NR90 486 aaKnown RBP7.89□□□□□ -1.15
SNX1-212ENST00000560861 IGHV3-38A0A0C4DH36 116 aa7.88□□□□□ -1.15
SNX1-212ENST00000560861 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
SNX1-212ENST00000560861 NTM-AS1Q6ZSK4 140 aa7.88□□□□□ -1.15
SNX1-212ENST00000560861 PHLDA1Q8WV24 401 aaPredicted RBP7.88□□□□□ -1.15
SNX1-212ENST00000560861 HSPB8Q9UJY1 196 aa7.88□□□□□ -1.15
SNX1-212ENST00000560861 COL7A1Q02388 2944 aa7.88□□□□□ -1.15
SNX1-212ENST00000560861 IGIPA6NJ69 53 aa7.87□□□□□ -1.15
SNX1-212ENST00000560861 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
SNX1-212ENST00000560861 GYPEP15421 78 aa7.87□□□□□ -1.15
SNX1-212ENST00000560861 Q6ZTC4 211 aa7.87□□□□□ -1.15
SNX1-212ENST00000560861 CYSLTR1Q9Y271 337 aa7.87□□□□□ -1.15
SNX1-212ENST00000560861 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 F5H768 121 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 PAX4O43316 350 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 BTF3P20290 206 aaKnown RBP7.86□□□□□ -1.15
SNX1-212ENST00000560861 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
SNX1-212ENST00000560861 KRTDAPP60985 99 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 RPL39P62891 51 aaKnown RBP7.86□□□□□ -1.15
SNX1-212ENST00000560861 COTL1Q14019 142 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 C11orf45Q8TAV5 145 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 GTSF1LQ9H1H1 148 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 ZMAT4Q9H898 229 aa7.86□□□□□ -1.15
SNX1-212ENST00000560861 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 H3BNG1 76 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 ATP5LO75964 103 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 G0S2P27469 103 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
SNX1-212ENST00000560861 A0A0J9YY99 117 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 ERASQ7Z444 233 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 ATP6V0E2Q8NHE4 81 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 PYGO1Q9Y3Y4 419 aa7.84□□□□□ -1.15
SNX1-212ENST00000560861 A0A096LPF7 62 aa7.83□□□□□ -1.16
SNX1-212ENST00000560861 NHLRC4P0CG21 123 aaPredicted RBP7.83□□□□□ -1.16
SNX1-212ENST00000560861 HTN3P15516 51 aa7.83□□□□□ -1.16
SNX1-212ENST00000560861 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
SNX1-212ENST00000560861 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
SNX1-212ENST00000560861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.82□□□□□ -1.16
SNX1-212ENST00000560861 TRBV6-8A0A0A6YYG3 113 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 IGKV2-29A2NJV5 120 aaPredicted RBP7.82□□□□□ -1.16
SNX1-212ENST00000560861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
SNX1-212ENST00000560861 NPSP0C0P6 89 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 ODF1Q14990 250 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 LGALS9CQ6DKI2 356 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 TEX43Q6ZNM6 134 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 BAALCQ8WXS3 180 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
SNX1-212ENST00000560861 SCGB1D1O95968 90 aa7.81□□□□□ -1.16
SNX1-212ENST00000560861 MRPL23Q16540 153 aaKnown RBP7.81□□□□□ -1.16
SNX1-212ENST00000560861 MRPL52Q86TS9 123 aaKnown RBP7.81□□□□□ -1.16
SNX1-212ENST00000560861 C12orf57Q99622 126 aa7.81□□□□□ -1.16
SNX1-212ENST00000560861 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
SNX1-212ENST00000560861 ICOSQ9Y6W8 199 aa7.81□□□□□ -1.16
SNX1-212ENST00000560861 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
SNX1-212ENST00000560861 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 DEFB131BA0A096LNP1 70 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 TRAV10A0A0B4J240 114 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 H7C423 109 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 TIRAPP58753 221 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 OPRPNQ99935 248 aaPredicted RBP7.8□□□□□ -1.16
SNX1-212ENST00000560861 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
SNX1-212ENST00000560861 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
SNX1-212ENST00000560861 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
SNX1-212ENST00000560861 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
SNX1-212ENST00000560861 A0A087WX48 190 aa7.79□□□□□ -1.16
SNX1-212ENST00000560861 FGF6P10767 208 aa7.79□□□□□ -1.16
SNX1-212ENST00000560861 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
SNX1-212ENST00000560861 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
SNX1-212ENST00000560861 AMELXQ99217 191 aa7.79□□□□□ -1.16
SNX1-212ENST00000560861 C20orf202A1L168 122 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 PRSS29PA6NIE9 313 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 PRSS1P07477 247 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 PMVKQ15126 192 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms