RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ADGRB1O14514 1584 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 MYH13Q9UKX3 1938 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 HECTD1Q9ULT8 2610 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 C10orf71Q711Q0 1435 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 BIRC6Q9NR09 4857 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 DBIP07108 87 aaKnown RBP-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 S100A3P33764 101 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 DCDP81605 110 aaKnown RBP-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 KRTAP6-2Q3LI66 62 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 BAGE3Q86Y29 109 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 SCN3BQ9NY72 215 aa-1.13□□□□□ -2.59
PSMA4-221ENST00000560842 ZNF609O15014 1411 aa-1.14□□□□□ -2.59
PSMA4-221ENST00000560842 LOC730098B7Z3J9 87 aa-1.14□□□□□ -2.59
PSMA4-221ENST00000560842 BCE1O60756 84 aa-1.14□□□□□ -2.59
PSMA4-221ENST00000560842 SPANXN1Q5VSR9 72 aa-1.14□□□□□ -2.59
PSMA4-221ENST00000560842 DNAH3Q8TD57 4116 aa-1.14□□□□□ -2.59
PSMA4-221ENST00000560842 GNG14A0A1W2PPG7 69 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 FAM92AA1XBS5 289 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 SPRR2AP35326 72 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 C9orf116Q5BN46 136 aaPredicted RBP-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 CFAP126Q5VTH2 177 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 C10orf82Q8WW14 230 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 TP53AIP1Q9HCN2 124 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 NPVFQ9HCQ7 196 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 SAR1AQ9NR31 198 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 RPRMQ9NS64 109 aa-1.15□□□□□ -2.59
PSMA4-221ENST00000560842 MUC17Q685J3 4493 aa-1.16□□□□□ -2.59
PSMA4-221ENST00000560842 DNAJC13O75165 2243 aa-1.16□□□□□ -2.59
PSMA4-221ENST00000560842 NCS1P62166 190 aa-1.16□□□□□ -2.6
PSMA4-221ENST00000560842 LRRC37A3O60309 1634 aa-1.16□□□□□ -2.6
PSMA4-221ENST00000560842 PCNX1Q96RV3 2341 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 FXYD6-FXYD2A0A087WZ82 144 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 A6NIN4 97 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 IFNA17P01571 189 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 SPRR2EP22531 72 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 MIC13Q5XKP0 118 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 WNK3Q9BYP7 1800 aa-1.17□□□□□ -2.6
PSMA4-221ENST00000560842 PKHD1L1Q86WI1 4243 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 PIRTP0C851 137 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 RPL7L1Q6DKI1 246 aaKnown RBP-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 SPAG11AQ6PDA7 123 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 SELENOSQ9BQE4 189 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 OVOS2A0A0J9YW53 1432 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 OVOS2Q6IE36 1432 aa-1.18□□□□□ -2.6
PSMA4-221ENST00000560842 FASNP49327 2511 aaKnown RBP-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 PLXNB2O15031 1838 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 H0YJX3 145 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 PITX3O75364 302 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 MMGT1Q8N4V1 131 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 CDK5RAP2Q96SN8 1893 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 LAMC1P11047 1609 aa-1.19□□□□□ -2.6
PSMA4-221ENST00000560842 MYO18BQ8IUG5 2567 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 DAPK1P53355 1430 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 KDM3BQ7LBC6 1761 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 TRBV6-1A0A0K0K1D8 114 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 I3L2K1 104 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 HAMPP81172 84 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 PIGYQ3MUY2 71 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 ZNF818PQ6ZRF7 136 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 VPS13DQ5THJ4 4388 aa-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 LAMA2P24043 3122 aaKnown RBP-1.2□□□□□ -2.6
PSMA4-221ENST00000560842 FAM236AA0A1B0GUQ0 79 aa-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 FAM236BA0A1B0GV22 79 aa-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 KLK9Q2XQG4 91 aa-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 PRRC2CQ9Y520 2896 aaKnown RBP-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 HTTP42858 3142 aa-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 TMEM2Q9UHN6 1383 aa-1.21□□□□□ -2.6
PSMA4-221ENST00000560842 IGLC6P0CF74 106 aa-1.22□□□□□ -2.6
PSMA4-221ENST00000560842 SPRR1BP22528 89 aa-1.22□□□□□ -2.6
PSMA4-221ENST00000560842 UBE2G1P62253 170 aa-1.22□□□□□ -2.6
PSMA4-221ENST00000560842 SMIM4Q8WVI0 70 aa-1.22□□□□□ -2.6
PSMA4-221ENST00000560842 ERCC6L2Q5T890 1561 aa-1.22□□□□□ -2.61
PSMA4-221ENST00000560842 AKAP9Q99996 3911 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 PKD1P98161 4303 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 TSPAN19P0C672 248 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 COX6B1P14854 86 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 TAC4Q86UU9 113 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 LAMA1P25391 3075 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 FAT3Q8TDW7 4589 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 ARHGEF10O15013 1369 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 DISP2A7MBM2 1401 aa-1.23□□□□□ -2.61
PSMA4-221ENST00000560842 PXDNQ92626 1479 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 M0R2T5 61 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 SPINK4O60575 86 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 CCL18P55774 89 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 LINC00312Q9Y6C7 94 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 R4GMQ9 66 aa-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 PRG4Q92954 1404 aaPredicted RBP-1.24□□□□□ -2.61
PSMA4-221ENST00000560842 SPG11Q96JI7 2443 aa-1.25□□□□□ -2.61
PSMA4-221ENST00000560842 LRP6O75581 1613 aa-1.25□□□□□ -2.61
PSMA4-221ENST00000560842 M0R129 80 aa-1.25□□□□□ -2.61
PSMA4-221ENST00000560842 MYH6P13533 1939 aa-1.25□□□□□ -2.61
PSMA4-221ENST00000560842 DNAH2Q9P225 4427 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 M0R135 149 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 TNRC18O15417 2968 aaPredicted RBP-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 NCR2O95944 276 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 SCGB1A1P11684 91 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 PIPP12273 146 aaPredicted RBP-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 CBLN1P23435 193 aa-1.26□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms