RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 IGHV3-21A0A0B4J1V1 117 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 EPM2AB3EWF7 344 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 PSMB8P28062 276 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 LINC00311Q8N616 119 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 CCL17Q92583 94 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 FAM215AQ9Y5M1 114 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 ZNF706Q9Y5V0 76 aaPredicted RBP4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 FAM201AQ5SY85 155 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 PRIMA1Q86XR5 153 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 Q8TAT8 98 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 CLEC2BQ92478 149 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 TIMM21Q9BVV7 248 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 DYNLRB1Q9NP97 96 aa4.9□□□□□ -1.63
TSPAN3-209ENST00000560715 FRYQ5TBA9 3013 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 IGHV1-69DA0A0B4J2H0 117 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 DNAJC9-AS1A6NH13 148 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 KIAA0087Q14695 138 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 SRRM5B3KS81 715 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 IGLV2-23P01705 113 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 SLC50A1Q9BRV3 221 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 LINC00574Q9H8X3 128 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 ZNRD1Q9P1U0 126 aa4.89□□□□□ -1.63
TSPAN3-209ENST00000560715 SPTBN2O15020 2390 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 TRAV8-3A0A0A6YYJ7 113 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 NPC2P61916 151 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 DAND5Q8N907 189 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 BSNQ9UPA5 3926 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 MAP1BP46821 2468 aaKnown RBP4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 A0A0J9YX75 114 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 LEPROTO15243 131 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 NDUFC2O95298 119 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 IGKV1-17P01599 117 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 SYNJ2BPP57105 145 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 LY6G5BQ8NDX9 201 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 DSCAML1Q8TD84 2053 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 ACACBO00763 2458 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 SVILO95425 2214 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 CFAP47Q6ZTR5 3102 aa4.88□□□□□ -1.63
TSPAN3-209ENST00000560715 EPG5Q9HCE0 2579 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 IGKV3D-20A0A0C4DH25 116 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 A0A0U1RQV1 116 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 I3L3M4 83 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 MRGPRG-AS1Q2M3A8 158 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 TPRP12270 2363 aaKnown RBP4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 VMA21Q3ZAQ7 101 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 LINC00337Q8N6G1 96 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
TSPAN3-209ENST00000560715 IGLV3-9A0A075B6K5 115 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 IGHV7-4-1A0A0J9YVY3 117 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 IGIPA6NJ69 53 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 CNOT1A5YKK6 2376 aaKnown RBP4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 NAV3Q8IVL0 2385 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 I3L2K1 104 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 FHL2Q14192 279 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 TMEM141Q96I45 108 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 C16orf95Q9H693 158 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 RNF7Q9UBF6 113 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 LHBP01229 141 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 RPL27AP46776 148 aaKnown RBP4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 SPANXN1Q5VSR9 72 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 NUP37Q8NFH4 326 aa4.86□□□□□ -1.63
TSPAN3-209ENST00000560715 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 PAX4O43316 350 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 URB1O60287 2271 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 LAMA5O15230 3695 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 PRR14LQ5THK1 2151 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 M0R381 172 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 DAZ2Q13117 558 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 DAZ4Q86SG3 579 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 RPL39LQ96EH5 51 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 TIMM17AQ99595 171 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 LITAFQ99732 161 aa4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 DAZ1Q9NQZ3 744 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 DAZ3Q9NR90 486 aaKnown RBP4.85□□□□□ -1.63
TSPAN3-209ENST00000560715 CHD8Q9HCK8 2581 aa4.84□□□□□ -1.63
TSPAN3-209ENST00000560715 IGHV3OR16-10A0A075B7F0 116 aa4.84□□□□□ -1.63
TSPAN3-209ENST00000560715 APELAP0DMC3 54 aa4.84□□□□□ -1.63
TSPAN3-209ENST00000560715 PPP1R17O96001 155 aa4.84□□□□□ -1.63
TSPAN3-209ENST00000560715 Q6JHZ5 121 aa4.84□□□□□ -1.63
TSPAN3-209ENST00000560715 TRBV12-3P01733 135 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 WFDC11Q8NEX6 87 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 RAI1Q7Z5J4 1906 aaPredicted RBP4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 IGHV1-46P01743 117 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 DYNAPQ8N1N2 210 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 PRRC2CQ9Y520 2896 aaKnown RBP4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 AKAP13Q12802 2813 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 DSCAMO60469 2012 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 FAM223AQ8IWN6 122 aa4.83□□□□□ -1.64
TSPAN3-209ENST00000560715 ZGRF1Q86YA3 2104 aa4.82□□□□□ -1.64
TSPAN3-209ENST00000560715 A0A087WW49 117 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms