RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LINC00315P59091 139 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 NRACQ8N912 160 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 PRSS3P2Q8NHM4 247 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 MRAP2Q96G30 205 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 HYDINQ4G0P3 5121 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 H7C1H1 209 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 C3orf79P0CE67 100 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 PMCHL1Q16048 86 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 FA2HQ7L5A8 372 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 AP5S1Q9NUS5 200 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 VPS13DQ5THJ4 4388 aa9.65□□□□□ -0.87
PKNOX1-209ENST00000560448 LOC389332A0A1B0GUA5 103 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 SCGB1D1O95968 90 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 ZNF56Q15929 161 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 Q9H8V8 135 aa9.64□□□□□ -0.87
PKNOX1-209ENST00000560448 IGLV2-18A0A075B6J9 118 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 A0A096LNJ9 63 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 TRAV26-2A0A0B4J265 109 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 KRTDAPP60985 99 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 S100A12P80511 92 aa9.63□□□□□ -0.87
PKNOX1-209ENST00000560448 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 PCP4L1A6NKN8 68 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 F5H697 171 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 TEX43Q6ZNM6 134 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 LINC00173Q6ZV60 143 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 GTSF1LQ9H1H1 148 aa9.62□□□□□ -0.87
PKNOX1-209ENST00000560448 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 SIVA1O15304 175 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 LELP1Q5T871 98 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 Q6ZR54 194 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 Q6ZSN1 163 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 Q8N8P6 123 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 DNAJC30Q96LL9 226 aa9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 NXT2Q9NPJ8 142 aaKnown RBP9.61□□□□□ -0.87
PKNOX1-209ENST00000560448 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
PKNOX1-209ENST00000560448 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
PKNOX1-209ENST00000560448 LEPROTL1O95214 131 aa9.6□□□□□ -0.87
PKNOX1-209ENST00000560448 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
PKNOX1-209ENST00000560448 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 GAGE1Q13065 139 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 GAGE4Q13068 117 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 GAGE5Q13069 117 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 ZNF664Q8N3J9 261 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
PKNOX1-209ENST00000560448 MGPP08493 103 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 UBE2D3P61077 147 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 UBE2D2P62837 147 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 LINC00336Q6ZUF6 198 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 TMEM70Q9BUB7 260 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
PKNOX1-209ENST00000560448 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 M0QY20 66 aa9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 DNAH10OSP0CZ25 163 aa9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 PKIAP61925 76 aa9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
PKNOX1-209ENST00000560448 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 PPP1R17O96001 155 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 HBDP02042 147 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 FCER1GP30273 86 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 SUMO4Q6EEV6 95 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 SUMO2P61956 95 aaKnown RBP9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 PET117Q6UWS5 81 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 PRO1933Q9H354 126 aa9.56□□□□□ -0.88
PKNOX1-209ENST00000560448 M0R2N4 97 aa9.55□□□□□ -0.88
PKNOX1-209ENST00000560448 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
PKNOX1-209ENST00000560448 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
PKNOX1-209ENST00000560448 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
PKNOX1-209ENST00000560448 LINC00587B1AMM8 73 aa9.54□□□□□ -0.88
PKNOX1-209ENST00000560448 LAGE3Q14657 143 aa9.54□□□□□ -0.88
PKNOX1-209ENST00000560448 WFDC10BQ8IUB3 73 aa9.54□□□□□ -0.88
PKNOX1-209ENST00000560448 C6orf223Q8N319 242 aa9.54□□□□□ -0.88
PKNOX1-209ENST00000560448 TSTD3H0UI37 97 aa9.53□□□□□ -0.88
PKNOX1-209ENST00000560448 K7EMI3 77 aa9.53□□□□□ -0.88
PKNOX1-209ENST00000560448 POLR2KP53803 58 aaKnown RBP9.53□□□□□ -0.88
PKNOX1-209ENST00000560448 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
PKNOX1-209ENST00000560448 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
PKNOX1-209ENST00000560448 Q9UF83 564 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms