RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
ETFA-213ENST00000560309 BLOC1S1P78537 153 aa13.37□□□□□ -0.27
ETFA-213ENST00000560309 COTL1Q14019 142 aa13.37□□□□□ -0.27
ETFA-213ENST00000560309 TEX261Q6UWH6 196 aa13.37□□□□□ -0.27
ETFA-213ENST00000560309 SMIM15Q7Z3B0 74 aa13.37□□□□□ -0.27
ETFA-213ENST00000560309 C20orf203Q8NBC4 194 aa13.36□□□□□ -0.27
ETFA-213ENST00000560309 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
ETFA-213ENST00000560309 TMEM250H0YL14 139 aa13.35□□□□□ -0.27
ETFA-213ENST00000560309 CLPSL2Q6UWE3 100 aa13.35□□□□□ -0.27
ETFA-213ENST00000560309 AMTP48728 403 aa13.34□□□□□ -0.27
ETFA-213ENST00000560309 NCR2O95944 276 aa13.33□□□□□ -0.28
ETFA-213ENST00000560309 CNBPP62633 177 aaKnown RBP13.33□□□□□ -0.28
ETFA-213ENST00000560309 RNASE7Q9H1E1 156 aaKnown RBP13.33□□□□□ -0.28
ETFA-213ENST00000560309 AP5S1Q9NUS5 200 aa13.33□□□□□ -0.28
ETFA-213ENST00000560309 H7C423 109 aa13.32□□□□□ -0.28
ETFA-213ENST00000560309 FAM231DQ6ZW35 169 aa13.32□□□□□ -0.28
ETFA-213ENST00000560309 IGLV4-60A0A075B6I1 120 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.31□□□□□ -0.28
ETFA-213ENST00000560309 A8MWL6 223 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 K7EN84 100 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 NDUFS6O75380 124 aaKnown RBP13.31□□□□□ -0.28
ETFA-213ENST00000560309 OXTP01178 125 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 CFAP161Q6P656 301 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 GATD1Q8NB37 220 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 FAM210AQ96ND0 272 aa13.31□□□□□ -0.28
ETFA-213ENST00000560309 hDV102S1A0JD36 115 aa13.3□□□□□ -0.28
ETFA-213ENST00000560309 GATCO43716 136 aaKnown RBP13.3□□□□□ -0.28
ETFA-213ENST00000560309 KRTAP10-4P60372 401 aaPredicted RBP13.3□□□□□ -0.28
ETFA-213ENST00000560309 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
ETFA-213ENST00000560309 LYPD6BQ8NI32 183 aa13.3□□□□□ -0.28
ETFA-213ENST00000560309 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
ETFA-213ENST00000560309 CT83Q5H943 113 aa13.29□□□□□ -0.28
ETFA-213ENST00000560309 GTSF1Q8WW33 167 aa13.28□□□□□ -0.28
ETFA-213ENST00000560309 RPL37AP61513 92 aaKnown RBP13.27□□□□□ -0.29
ETFA-213ENST00000560309 AMMECR1LQ6DCA0 310 aa13.27□□□□□ -0.29
ETFA-213ENST00000560309 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
ETFA-213ENST00000560309 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
ETFA-213ENST00000560309 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
ETFA-213ENST00000560309 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
ETFA-213ENST00000560309 ALKAL2Q6UX46 152 aa13.25□□□□□ -0.29
ETFA-213ENST00000560309 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
ETFA-213ENST00000560309 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
ETFA-213ENST00000560309 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
ETFA-213ENST00000560309 APCSP02743 223 aa13.24□□□□□ -0.29
ETFA-213ENST00000560309 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
ETFA-213ENST00000560309 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
ETFA-213ENST00000560309 I3L3M4 83 aa13.23□□□□□ -0.29
ETFA-213ENST00000560309 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
ETFA-213ENST00000560309 SERTAD4-AS1Q5TG53 156 aa13.23□□□□□ -0.29
ETFA-213ENST00000560309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.23□□□□□ -0.29
ETFA-213ENST00000560309 RPL39LQ96EH5 51 aaKnown RBP13.22□□□□□ -0.29
ETFA-213ENST00000560309 DPH3Q96FX2 82 aa13.22□□□□□ -0.29
ETFA-213ENST00000560309 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
ETFA-213ENST00000560309 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
ETFA-213ENST00000560309 PMCHP20382 165 aa13.21□□□□□ -0.29
ETFA-213ENST00000560309 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.29
ETFA-213ENST00000560309 TSKUQ8WUA8 353 aa13.21□□□□□ -0.29
ETFA-213ENST00000560309 BTF3L4Q96K17 158 aa13.21□□□□□ -0.29
ETFA-213ENST00000560309 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 FGF6P10767 208 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 CEBPGP53567 150 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 SMIM7Q9BQ49 75 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 TMEM191AQ9H0A3 160 aa13.2□□□□□ -0.3
ETFA-213ENST00000560309 CHCHD10Q8WYQ3 142 aaPredicted RBP13.19□□□□□ -0.3
ETFA-213ENST00000560309 ST20Q9HBF5 79 aa13.19□□□□□ -0.3
ETFA-213ENST00000560309 OSTCQ9NRP0 149 aa13.19□□□□□ -0.3
ETFA-213ENST00000560309 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
ETFA-213ENST00000560309 SLPIP03973 132 aa13.18□□□□□ -0.3
ETFA-213ENST00000560309 RPS10P46783 165 aaKnown RBP13.18□□□□□ -0.3
ETFA-213ENST00000560309 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
ETFA-213ENST00000560309 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
ETFA-213ENST00000560309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
ETFA-213ENST00000560309 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
ETFA-213ENST00000560309 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 HIGD1CA8MV81 97 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 PPP1R17O96001 155 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 C15orf56Q8N910 161 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 PKIGQ9Y2B9 76 aa13.17□□□□□ -0.3
ETFA-213ENST00000560309 PANO1I0J062 215 aa13.16□□□□□ -0.3
ETFA-213ENST00000560309 ESDP10768 282 aa13.15□□□□□ -0.3
ETFA-213ENST00000560309 A0A087WYN8 130 aa13.14□□□□□ -0.31
ETFA-213ENST00000560309 GVQW2A0A096LPI5 108 aaPredicted RBP13.14□□□□□ -0.31
ETFA-213ENST00000560309 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
ETFA-213ENST00000560309 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
ETFA-213ENST00000560309 RIGQ13278 110 aa13.14□□□□□ -0.31
ETFA-213ENST00000560309 FAM74A3Q4VXF1 159 aa13.14□□□□□ -0.31
ETFA-213ENST00000560309 SPACA4Q8TDM5 124 aa13.14□□□□□ -0.31
ETFA-213ENST00000560309 TRBV27A0A0K0K1C4 114 aa13.13□□□□□ -0.31
ETFA-213ENST00000560309 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
ETFA-213ENST00000560309 RAB4AP20338 218 aa13.13□□□□□ -0.31
ETFA-213ENST00000560309 Q6ZRU5 148 aa13.13□□□□□ -0.31
ETFA-213ENST00000560309 PLAC8Q9NZF1 115 aa13.13□□□□□ -0.31
ETFA-213ENST00000560309 VCYO14598 125 aa13.12□□□□□ -0.31
ETFA-213ENST00000560309 SS18Q15532 418 aa13.12□□□□□ -0.31
ETFA-213ENST00000560309 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
ETFA-213ENST00000560309 LRP1Q07954 4544 aaKnown RBP13.11□□□□□ -0.31
ETFA-213ENST00000560309 CCL25O15444 150 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms