RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 HTN3P15516 51 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 AMTP48728 403 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 CRYBA4P53673 196 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 COTL1Q14019 142 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 LAGE3Q14657 143 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 C12orf74Q32Q52 190 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 TMEM97Q5BJF2 176 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 Q6ZSN1 163 aa4.54□□□□□ -1.68
SPG11-221ENST00000560299 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 NUDT3O95989 172 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 HBDP02042 147 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 P0DMU3 169 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 FAM231AP0DMU4 169 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 FAM231CP0DMU5 169 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 GYPEP15421 78 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 GAGE1Q13065 139 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 GAGE4Q13068 117 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 GAGE5Q13069 117 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 MRPL23Q16540 153 aaKnown RBP4.53□□□□□ -1.68
SPG11-221ENST00000560299 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 PACRGQ96M98 296 aaPredicted RBP4.53□□□□□ -1.68
SPG11-221ENST00000560299 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
SPG11-221ENST00000560299 IGLV2-18A0A075B6J9 118 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 TRAV26-1A0A087WT03 109 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 DEFB131BA0A096LNP1 70 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 H3BNG1 76 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 BTF3P20290 206 aaKnown RBP4.52□□□□□ -1.69
SPG11-221ENST00000560299 NANOS2P60321 138 aaKnown RBP4.52□□□□□ -1.69
SPG11-221ENST00000560299 UBE2D3P61077 147 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 UBE2D2P62837 147 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 PDZD11Q5EBL8 140 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 Q6ZTC4 211 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 HIST3H2BBQ8N257 126 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 ATP6V0E2Q8NHE4 81 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 GTSF1LQ9H1H1 148 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 HSPB8Q9UJY1 196 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 ICOSQ9Y6W8 199 aa4.52□□□□□ -1.69
SPG11-221ENST00000560299 DYNC2H1Q8NCM8 4307 aaKnown RBP4.51□□□□□ -1.69
SPG11-221ENST00000560299 A0A0J9YY99 117 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 NUPR1O60356 82 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 FABP4P15090 132 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 TCTAP57738 103 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 TNP2Q05952 138 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 NEGR1Q7Z3B1 354 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 FAM19A2Q8N3H0 131 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
SPG11-221ENST00000560299 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
SPG11-221ENST00000560299 KMT2CQ8NEZ4 4911 aaKnown RBP4.5□□□□□ -1.69
SPG11-221ENST00000560299 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 IGHV1-24A0A0C4DH33 117 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 IGHV3-38A0A0C4DH36 116 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.5□□□□□ -1.69
SPG11-221ENST00000560299 H7C423 109 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 UBE2L6O14933 153 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 ATP5LO75964 103 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 TSHBP01222 138 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 LINC00310P59036 64 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 PAPPA-AS1Q5QFB9 102 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 C2orf66Q6UXQ4 117 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 C15orf53Q8NAA6 179 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 MUC7Q8TAX7 377 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 VSIG2Q96IQ7 327 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 HIST1H2BLQ99880 126 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 Q9UF83 564 aa4.5□□□□□ -1.69
SPG11-221ENST00000560299 CSMD3Q7Z407 3707 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 TRBV6-8A0A0A6YYG3 113 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 LOC100131303A0A0U1RQF7 123 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 NPSP0C0P6 89 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 AKR1D1P51857 326 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 PKIAP61925 76 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 DGAT2L7PQ6IED9 249 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 Q6ZN92 141 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 ERASQ7Z444 233 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 C20orf203Q8NBC4 194 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 OR10D4PQ8NGN7 298 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
SPG11-221ENST00000560299 A0A096LPF7 62 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 C20orf202A1L168 122 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 PRSS1P07477 247 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TIRAPP58753 221 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 KRTDAPP60985 99 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 AMMECR1LQ6DCA0 310 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
SPG11-221ENST00000560299 SPANXA1Q9NS26 97 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms