RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
SMAD3-212ENST00000559937 TNFRSF18Q9Y5U5 241 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 LEPROTO15243 131 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 HILS1P60008 231 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 SAMD5Q5TGI4 173 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 SPANXA1Q9NS26 97 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
SMAD3-212ENST00000559937 STAB1Q9NY15 2570 aa5.88□□□□□ -1.47
SMAD3-212ENST00000559937 TMEM223A0PJW6 202 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 C12orf74Q32Q52 190 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 RAB37Q96AX2 223 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 AMELXQ99217 191 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
SMAD3-212ENST00000559937 TIMM21Q9BVV7 248 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 VCX2Q9H322 139 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
SMAD3-212ENST00000559937 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 IGLL5B9A064 214 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 J3QQQ9 107 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 CIDEAO60543 219 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 IGLV1-51P01701 117 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 HTN1P15515 57 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 TMEM170BQ5T4T1 132 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 C1orf158Q8N1D5 194 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 ZNRF2Q8NHG8 242 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 DNHD1Q96M86 4753 aa5.86□□□□□ -1.47
SMAD3-212ENST00000559937 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 A0A0J9YY99 117 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 TRBV10-1A0A0K0K1A3 114 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 A0A1W2PRX2 142 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 ZNF22P17026 224 aaPredicted RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 LGALS3P17931 250 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 UBE2D1P51668 147 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 MRPS36P82909 103 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 SMAGPQ0VAQ4 97 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 COTL1Q14019 142 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 RRN3P1Q2M238 152 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 RNASE8Q8TDE3 154 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 TMEM263Q8WUH6 116 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 ZNF479Q96JC4 524 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 CHCHD7Q9BUK0 85 aa5.85□□□□□ -1.47
SMAD3-212ENST00000559937 MRPL16Q9NX20 251 aaKnown RBP5.85□□□□□ -1.47
SMAD3-212ENST00000559937 IGHV3-73A0A0B4J1V6 119 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 K7ERJ3 54 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 K7ERU9 68 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 PROK1P58294 105 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
SMAD3-212ENST00000559937 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMAD3-212ENST00000559937 OCIAD2Q56VL3 154 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 Q6ZSN1 163 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 SLC25A29Q8N8R3 303 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 XCL2Q9UBD3 114 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 UBE2D4Q9Y2X8 147 aa5.84□□□□□ -1.47
SMAD3-212ENST00000559937 WNK1Q9H4A3 2382 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 ADARB2-AS1A8MUL3 147 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 SAP30O75446 220 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 AZU1P20160 251 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 EMP1P54849 157 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 RBX1P62877 108 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 NDUFA11Q86Y39 141 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 C11orf44Q8N8P7 122 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 FAM104AQ969W3 186 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 C16orf74Q96GX8 76 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
SMAD3-212ENST00000559937 SMR3AQ99954 134 aa5.83□□□□□ -1.48
SMAD3-212ENST00000559937 NAA38Q9BRA0 125 aaKnown RBP5.83□□□□□ -1.48
SMAD3-212ENST00000559937 TMEM238C9JI98 176 aa5.82□□□□□ -1.48
SMAD3-212ENST00000559937 K7EQD1 137 aa5.82□□□□□ -1.48
SMAD3-212ENST00000559937 RPL36AP83881 106 aaKnown RBP5.82□□□□□ -1.48
SMAD3-212ENST00000559937 FAM19A3Q7Z5A8 133 aa5.82□□□□□ -1.48
SMAD3-212ENST00000559937 DEFB104AQ8WTQ1 72 aa5.82□□□□□ -1.48
SMAD3-212ENST00000559937 RPL36ALQ969Q0 106 aaKnown RBP5.82□□□□□ -1.48
SMAD3-212ENST00000559937 C19orf73Q9NVV2 129 aa5.82□□□□□ -1.48
SMAD3-212ENST00000559937 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
SMAD3-212ENST00000559937 IGLV5-45A0A087WSX0 123 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 F8W1H4 67 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 IGHV3-30P01768 117 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 PRM2P04554 102 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 IGHV3-30-5P0DP03 117 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 TIRAPP58753 221 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 DAZ4Q86SG3 579 aaKnown RBP5.81□□□□□ -1.48
SMAD3-212ENST00000559937 OVOL2Q9BRP0 275 aa5.81□□□□□ -1.48
SMAD3-212ENST00000559937 DAZ3Q9NR90 486 aaKnown RBP5.81□□□□□ -1.48
SMAD3-212ENST00000559937 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
SMAD3-212ENST00000559937 LY6G6DO95868 133 aa5.8□□□□□ -1.48
SMAD3-212ENST00000559937 GIG44P09565 113 aaPredicted RBP5.8□□□□□ -1.48
SMAD3-212ENST00000559937 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
SMAD3-212ENST00000559937 HIST2H2BDQ6DRA6 164 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms