RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 S100A6P06703 90 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 LINC00614P0C842 121 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 AMTP48728 403 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 LAGE3Q14657 143 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 GTSF1LQ9H1H1 148 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
TPM1-221ENST00000559831 NUPR1O60356 82 aa7.22□□□□□ -1.25
TPM1-221ENST00000559831 LINC00310P59036 64 aa7.22□□□□□ -1.25
TPM1-221ENST00000559831 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
TPM1-221ENST00000559831 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
TPM1-221ENST00000559831 TMEM97Q5BJF2 176 aa7.22□□□□□ -1.25
TPM1-221ENST00000559831 CHCHD1Q96BP2 118 aaKnown RBP7.22□□□□□ -1.25
TPM1-221ENST00000559831 TRBV25-1A0A075B6N4 114 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 TRBV6-8A0A0A6YYG3 113 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 IGHV1-24A0A0C4DH33 117 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 HSBP1O75506 76 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 BTF3P20290 206 aaKnown RBP7.21□□□□□ -1.26
TPM1-221ENST00000559831 LYPD5Q6UWN5 251 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
TPM1-221ENST00000559831 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.2□□□□□ -1.26
TPM1-221ENST00000559831 IGKV2-29A2NJV5 120 aaPredicted RBP7.2□□□□□ -1.26
TPM1-221ENST00000559831 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 K7EMI3 77 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 UBE2L6O14933 153 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 ESRGQ1W209 222 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 TMEM243Q9BU79 118 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 CHCHD7Q9BUK0 85 aa7.2□□□□□ -1.26
TPM1-221ENST00000559831 TGP01266 2768 aa7.19□□□□□ -1.26
TPM1-221ENST00000559831 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
TPM1-221ENST00000559831 GAGE6Q13070 117 aa7.19□□□□□ -1.26
TPM1-221ENST00000559831 COA6Q5JTJ3 125 aaKnown RBP7.19□□□□□ -1.26
TPM1-221ENST00000559831 LELP1Q5T871 98 aa7.19□□□□□ -1.26
TPM1-221ENST00000559831 TRAV8-6A0A0B4J262 113 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 TMEM262E9PQX1 116 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 HBDP02042 147 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 ESDP10768 282 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 CCL18P55774 89 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 TIRAPP58753 221 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
TPM1-221ENST00000559831 C2orf66Q6UXQ4 117 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 TMEM18Q96B42 140 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 CYSLTR1Q9Y271 337 aa7.18□□□□□ -1.26
TPM1-221ENST00000559831 A0A096LNJ9 63 aa7.17□□□□□ -1.26
TPM1-221ENST00000559831 G0S2P27469 103 aa7.17□□□□□ -1.26
TPM1-221ENST00000559831 TCTAP57738 103 aa7.17□□□□□ -1.26
TPM1-221ENST00000559831 AMMECR1LQ6DCA0 310 aa7.17□□□□□ -1.26
TPM1-221ENST00000559831 LINC00588Q9Y4M8 146 aa7.17□□□□□ -1.26
TPM1-221ENST00000559831 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 FABP4P15090 132 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 S100A2P29034 98 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 HIST3H2BBQ8N257 126 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 TOMM6Q96B49 74 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 MRPS16Q9Y3D3 137 aaKnown RBP7.16□□□□□ -1.26
TPM1-221ENST00000559831 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
TPM1-221ENST00000559831 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
TPM1-221ENST00000559831 FGF6P10767 208 aa7.15□□□□□ -1.26
TPM1-221ENST00000559831 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
TPM1-221ENST00000559831 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.26
TPM1-221ENST00000559831 H7C423 109 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 IGHV3-30P01768 117 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 IGHV3-30-3P0DP02 117 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 IGHV3-30-5P0DP03 117 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 SMAGPQ0VAQ4 97 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 LINC00173Q6ZV60 143 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 Q8N3U1 123 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
TPM1-221ENST00000559831 DYNC2H1Q8NCM8 4307 aaKnown RBP7.14□□□□□ -1.27
TPM1-221ENST00000559831 A0A087WX48 190 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 PKIAP61925 76 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
TPM1-221ENST00000559831 Q8N976 141 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 OR5A1Q8NGJ0 315 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
TPM1-221ENST00000559831 SPANXA1Q9NS26 97 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 HSPB8Q9UJY1 196 aa7.13□□□□□ -1.27
TPM1-221ENST00000559831 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.12□□□□□ -1.27
TPM1-221ENST00000559831 SIVA1O15304 175 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 ATP5LO75964 103 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 ZNF25P17030 456 aaPredicted RBP7.12□□□□□ -1.27
TPM1-221ENST00000559831 RBX1P62877 108 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 Q6ZUT4 128 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 ERASQ7Z444 233 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 MRPL52Q86TS9 123 aaKnown RBP7.12□□□□□ -1.27
TPM1-221ENST00000559831 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 TIMM21Q9BVV7 248 aa7.12□□□□□ -1.27
TPM1-221ENST00000559831 CSMD3Q7Z407 3707 aa7.11□□□□□ -1.27
TPM1-221ENST00000559831 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms