RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PCNX1Q96RV3 2341 aa-0.97□□□□□ -2.56
CASC4-210ENST00000559550 DYNC1H1Q14204 4646 aaKnown RBP-0.98□□□□□ -2.57
CASC4-210ENST00000559550 CSPG4Q6UVK1 2322 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 SPTA1P02549 2419 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 ARFGEF1Q9Y6D6 1849 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 TRAV22A0A0B4J277 110 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 M0R129 80 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 NBEAP1P0C6P0 100 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 UBE2D1P51668 147 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 VSTM2AQ8TAG5 236 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 TACC2O95359 2948 aa-0.98□□□□□ -2.57
CASC4-210ENST00000559550 PIRTP0C851 137 aa-0.99□□□□□ -2.57
CASC4-210ENST00000559550 C9orf116Q5BN46 136 aaPredicted RBP-0.99□□□□□ -2.57
CASC4-210ENST00000559550 SIPA1L3O60292 1781 aaPredicted RBP-0.99□□□□□ -2.57
CASC4-210ENST00000559550 TEX15Q9BXT5 2789 aa-1□□□□□ -2.57
CASC4-210ENST00000559550 PIN1P1O15428 100 aa-1□□□□□ -2.57
CASC4-210ENST00000559550 SPANXN1Q5VSR9 72 aa-1□□□□□ -2.57
CASC4-210ENST00000559550 Q5VV11 94 aa-1□□□□□ -2.57
CASC4-210ENST00000559550 PKD1P98161 4303 aa-1□□□□□ -2.57
CASC4-210ENST00000559550 PARP14Q460N5 1801 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 USF3Q68DE3 2245 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 FAM236AA0A1B0GUQ0 79 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 FAM236BA0A1B0GV22 79 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 NCS1P62166 190 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 KRTAP6-2Q3LI66 62 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 CCDC153Q494R4 210 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 Q8IZM0 81 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 RPRMQ9NS64 109 aa-1.01□□□□□ -2.57
CASC4-210ENST00000559550 LAMA1P25391 3075 aa-1.02□□□□□ -2.57
CASC4-210ENST00000559550 S100A5P33763 92 aa-1.02□□□□□ -2.57
CASC4-210ENST00000559550 UBE2G1P62253 170 aa-1.02□□□□□ -2.57
CASC4-210ENST00000559550 LAMA3Q16787 3333 aa-1.02□□□□□ -2.57
CASC4-210ENST00000559550 PITX3O75364 302 aa-1.03□□□□□ -2.57
CASC4-210ENST00000559550 MORN2Q502X0 79 aa-1.03□□□□□ -2.57
CASC4-210ENST00000559550 CFAP126Q5VTH2 177 aa-1.03□□□□□ -2.57
CASC4-210ENST00000559550 SCN3BQ9NY72 215 aa-1.03□□□□□ -2.57
CASC4-210ENST00000559550 MGAM2Q2M2H8 2515 aa-1.03□□□□□ -2.57
CASC4-210ENST00000559550 IFT172Q9UG01 1749 aa-1.03□□□□□ -2.58
CASC4-210ENST00000559550 PI4KAP42356 2102 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 ANKRD11Q6UB99 2663 aaPredicted RBP-1.04□□□□□ -2.58
CASC4-210ENST00000559550 GNG14A0A1W2PPG7 69 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 FAM92AA1XBS5 289 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 BCE1O60756 84 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 DBIP07108 87 aaKnown RBP-1.04□□□□□ -2.58
CASC4-210ENST00000559550 SPRR2BP35325 72 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 RPL7L1Q6DKI1 246 aaKnown RBP-1.04□□□□□ -2.58
CASC4-210ENST00000559550 SAR1AQ9NR31 198 aa-1.04□□□□□ -2.58
CASC4-210ENST00000559550 APOBP04114 4563 aaKnown RBP-1.05□□□□□ -2.58
CASC4-210ENST00000559550 RIF1Q5UIP0 2472 aaKnown RBP-1.05□□□□□ -2.58
CASC4-210ENST00000559550 H0YJX3 145 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 APOC4-APOC2K7ER74 178 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 IGLC6P0CF74 106 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 HAMPP81172 84 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 BAGE3Q86Y29 109 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 SELENOSQ9BQE4 189 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 SPANXCQ9NY87 97 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 DNAH9Q9NYC9 4486 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 COL6A5A8TX70 2615 aa-1.05□□□□□ -2.58
CASC4-210ENST00000559550 ZNF609O15014 1411 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 ITPR1Q14643 2758 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 NBEAL2Q6ZNJ1 2754 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 ARHGEF10O15013 1369 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 MYH13Q9UKX3 1938 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 A6NIN4 97 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 MMGT1Q8N4V1 131 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 SPTSSBQ8NFR3 76 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 NPVFQ9HCQ7 196 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 SPCS1Q9Y6A9 102 aa-1.06□□□□□ -2.58
CASC4-210ENST00000559550 PRKDCP78527 4128 aaKnown RBP-1.06□□□□□ -2.58
CASC4-210ENST00000559550 MTORP42345 2549 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 LAMC1P11047 1609 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 IFNA17P01571 189 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 SPRR2EP22531 72 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 HIST1H1AQ02539 215 aaPredicted RBP-1.07□□□□□ -2.58
CASC4-210ENST00000559550 AIF1LQ9BQI0 150 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 C10orf71Q711Q0 1435 aa-1.07□□□□□ -2.58
CASC4-210ENST00000559550 SACSQ9NZJ4 4579 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 NPFFO15130 113 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 ZNF818PQ6ZRF7 136 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 LINC00312Q9Y6C7 94 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 BCL9LQ86UU0 1499 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 A0A0C4DFX4 3053 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 DNAH11Q96DT5 4516 aa-1.08□□□□□ -2.58
CASC4-210ENST00000559550 HTTP42858 3142 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.09□□□□□ -2.58
CASC4-210ENST00000559550 IL5P05113 134 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 SMIM6P0DI80 62 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 KLK9Q2XQG4 91 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 Q6ZUT4 128 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 SPANXA1Q9NS26 97 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 SRCAPQ6ZRS2 3230 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 ADGRB1O14514 1584 aa-1.09□□□□□ -2.58
CASC4-210ENST00000559550 LINC00694P0DN24 101 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 OVOS2A0A0J9YW53 1432 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 OVOS2Q6IE36 1432 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 AKAP9Q99996 3911 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 VPS13BQ7Z7G8 4022 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 URB1O60287 2271 aaKnown RBP-1.1□□□□□ -2.59
CASC4-210ENST00000559550 CUBNO60494 3623 aa-1.1□□□□□ -2.59
CASC4-210ENST00000559550 NBASA2RRP1 2371 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms