RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PRO1933Q9H354 126 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
TPM1-215ENST00000558868 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 ATOH7Q8N100 152 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 SLC25A29Q8N8R3 303 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
TPM1-215ENST00000558868 A0A087WX48 190 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 FHL2Q14192 279 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 ODF1Q14990 250 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 Q8NAQ8 132 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 DKK2Q9UBU2 259 aa9.79□□□□□ -0.84
TPM1-215ENST00000558868 MGAM2Q2M2H8 2515 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 DPM2O94777 84 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 NPSP0C0P6 89 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 PMCHL2Q9BQD1 86 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
TPM1-215ENST00000558868 GAGE12JA6NER3 117 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 PLNP26678 52 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 UBE2D3P61077 147 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 DAD1P61803 113 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 UBE2D2P62837 147 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 GAGE1Q13065 139 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 GAGE4Q13068 117 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 GAGE5Q13069 117 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 GAGE13Q4V321 117 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.85
TPM1-215ENST00000558868 BAALCQ8WXS3 180 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 HHLA3Q9XRX5 114 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
TPM1-215ENST00000558868 IGKCP01834 107 aa9.76□□□□□ -0.85
TPM1-215ENST00000558868 DDTP30046 118 aa9.76□□□□□ -0.85
TPM1-215ENST00000558868 RPL39P62891 51 aaKnown RBP9.76□□□□□ -0.85
TPM1-215ENST00000558868 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
TPM1-215ENST00000558868 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
TPM1-215ENST00000558868 Q9UF83 564 aa9.76□□□□□ -0.85
TPM1-215ENST00000558868 CHTOPQ9Y3Y2 248 aaKnown RBP9.76□□□□□ -0.85
TPM1-215ENST00000558868 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
TPM1-215ENST00000558868 F8VRH5 84 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 CRYBA4P53673 196 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 PMVKQ15126 192 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 UQCR10Q9UDW1 63 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 PRO0255Q9UI72 69 aa9.75□□□□□ -0.85
TPM1-215ENST00000558868 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
TPM1-215ENST00000558868 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
TPM1-215ENST00000558868 ATP5G1P05496 136 aa9.74□□□□□ -0.85
TPM1-215ENST00000558868 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
TPM1-215ENST00000558868 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
TPM1-215ENST00000558868 MRPL35Q9NZE8 188 aaKnown RBP9.74□□□□□ -0.85
TPM1-215ENST00000558868 PRSS29PA6NIE9 313 aa9.73□□□□□ -0.85
TPM1-215ENST00000558868 DEFB4AO15263 64 aa9.73□□□□□ -0.85
TPM1-215ENST00000558868 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
TPM1-215ENST00000558868 KPRPQ5T749 579 aaPredicted RBP9.73□□□□□ -0.85
TPM1-215ENST00000558868 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
TPM1-215ENST00000558868 TRRAPQ9Y4A5 3859 aa9.73□□□□□ -0.85
TPM1-215ENST00000558868 VCX2Q9H322 139 aa9.72□□□□□ -0.85
TPM1-215ENST00000558868 C11orf68Q9H3H3 251 aaKnown RBP9.72□□□□□ -0.85
TPM1-215ENST00000558868 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
TPM1-215ENST00000558868 BIRC6Q9NR09 4857 aa9.71□□□□□ -0.85
TPM1-215ENST00000558868 H7C423 109 aa9.71□□□□□ -0.86
TPM1-215ENST00000558868 PAX4O43316 350 aa9.71□□□□□ -0.86
TPM1-215ENST00000558868 LINC00694P0DN24 101 aa9.71□□□□□ -0.86
TPM1-215ENST00000558868 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 LINC00587B1AMM8 73 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 GYPEP15421 78 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
TPM1-215ENST00000558868 DEFA6Q01524 100 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 TMEM243Q9BU79 118 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 CELA1Q9UNI1 258 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
TPM1-215ENST00000558868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
TPM1-215ENST00000558868 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
TPM1-215ENST00000558868 UBE2L6O14933 153 aa9.69□□□□□ -0.86
TPM1-215ENST00000558868 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
TPM1-215ENST00000558868 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
TPM1-215ENST00000558868 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
TPM1-215ENST00000558868 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
TPM1-215ENST00000558868 SPATA25Q9BR10 227 aa9.69□□□□□ -0.86
TPM1-215ENST00000558868 CSDC2Q9Y534 153 aaKnown RBP9.69□□□□□ -0.86
TPM1-215ENST00000558868 COX8AP10176 69 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 STPG4Q8N801 248 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 AMELXQ99217 191 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 3109 ms