RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
VPS18-202ENST00000558474 C5orf52A6NGY3 159 aa10.35□□□□□ -0.75
VPS18-202ENST00000558474 PACRGQ96M98 296 aaPredicted RBP10.35□□□□□ -0.75
VPS18-202ENST00000558474 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
VPS18-202ENST00000558474 TCTAP57738 103 aa10.34□□□□□ -0.75
VPS18-202ENST00000558474 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
VPS18-202ENST00000558474 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
VPS18-202ENST00000558474 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
VPS18-202ENST00000558474 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 IGHV1-24A0A0C4DH33 117 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 H7C423 109 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 NUPR1O60356 82 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 NUDT3O95989 172 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 HBDP02042 147 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
VPS18-202ENST00000558474 SMAGPQ0VAQ4 97 aa10.32□□□□□ -0.76
VPS18-202ENST00000558474 AMTP48728 403 aa10.31□□□□□ -0.76
VPS18-202ENST00000558474 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
VPS18-202ENST00000558474 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
VPS18-202ENST00000558474 C20orf203Q8NBC4 194 aa10.31□□□□□ -0.76
VPS18-202ENST00000558474 IGLL5B9A064 214 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 S100A2P29034 98 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 PKIAP61925 76 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 LELP1Q5T871 98 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
VPS18-202ENST00000558474 A0A096LNJ9 63 aa10.29□□□□□ -0.76
VPS18-202ENST00000558474 NPSP0C0P6 89 aa10.29□□□□□ -0.76
VPS18-202ENST00000558474 BTF3P20290 206 aaKnown RBP10.29□□□□□ -0.76
VPS18-202ENST00000558474 LYPD5Q6UWN5 251 aa10.29□□□□□ -0.76
VPS18-202ENST00000558474 C2orf66Q6UXQ4 117 aa10.29□□□□□ -0.76
VPS18-202ENST00000558474 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
VPS18-202ENST00000558474 STAB2Q8WWQ8 2551 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 PDZD11Q5EBL8 140 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 FAM19A2Q8N3H0 131 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 TIMM21Q9BVV7 248 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
VPS18-202ENST00000558474 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
VPS18-202ENST00000558474 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
VPS18-202ENST00000558474 MUC7Q8TAX7 377 aa10.27□□□□□ -0.77
VPS18-202ENST00000558474 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
VPS18-202ENST00000558474 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
VPS18-202ENST00000558474 UBE2L6O14933 153 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 ATP5LO75964 103 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
VPS18-202ENST00000558474 PMCHL1Q16048 86 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 ERASQ7Z444 233 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
VPS18-202ENST00000558474 TRAV8-6A0A0B4J262 113 aa10.25□□□□□ -0.77
VPS18-202ENST00000558474 CCL18P55774 89 aa10.25□□□□□ -0.77
VPS18-202ENST00000558474 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
VPS18-202ENST00000558474 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
VPS18-202ENST00000558474 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
VPS18-202ENST00000558474 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 ESRGQ1W209 222 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 DEFB104AQ8WTQ1 72 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
VPS18-202ENST00000558474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.23□□□□□ -0.77
VPS18-202ENST00000558474 IGKV2-29A2NJV5 120 aaPredicted RBP10.23□□□□□ -0.77
VPS18-202ENST00000558474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
VPS18-202ENST00000558474 RPL39P62891 51 aaKnown RBP10.23□□□□□ -0.77
VPS18-202ENST00000558474 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
VPS18-202ENST00000558474 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 FGF6P10767 208 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 FABP4P15090 132 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 AMMECR1LQ6DCA0 310 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 UPK3BQ9BT76 320 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 MRPS16Q9Y3D3 137 aaKnown RBP10.22□□□□□ -0.77
VPS18-202ENST00000558474 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
VPS18-202ENST00000558474 C3orf84H3BNL1 204 aa10.21□□□□□ -0.77
VPS18-202ENST00000558474 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
VPS18-202ENST00000558474 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.77
VPS18-202ENST00000558474 DYNC2H1Q8NCM8 4307 aaKnown RBP10.21□□□□□ -0.78
VPS18-202ENST00000558474 Q6ZN92 141 aa10.2□□□□□ -0.78
VPS18-202ENST00000558474 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
VPS18-202ENST00000558474 GAGE6Q13070 117 aa10.19□□□□□ -0.78
VPS18-202ENST00000558474 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
VPS18-202ENST00000558474 OR5A1Q8NGJ0 315 aa10.19□□□□□ -0.78
VPS18-202ENST00000558474 LINC00588Q9Y4M8 146 aa10.19□□□□□ -0.78
VPS18-202ENST00000558474 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
VPS18-202ENST00000558474 A0A087WX48 190 aa10.18□□□□□ -0.78
VPS18-202ENST00000558474 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
VPS18-202ENST00000558474 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
VPS18-202ENST00000558474 CDC42SE2Q9NRR3 84 aa10.18□□□□□ -0.78
VPS18-202ENST00000558474 K7EP13 123 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 AKR1D1P51857 326 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 RBX1P62877 108 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms