RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
TSPAN3-204ENST00000558394 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
TSPAN3-204ENST00000558394 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 MAP1LC3B2A6NCE7 125 aa10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 RASL11AQ6T310 242 aa10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 MAP1LC3BQ9GZQ8 125 aa10.99□□□□□ -0.65
TSPAN3-204ENST00000558394 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
TSPAN3-204ENST00000558394 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
TSPAN3-204ENST00000558394 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
TSPAN3-204ENST00000558394 CACNG7P62955 275 aa10.97□□□□□ -0.65
TSPAN3-204ENST00000558394 BAGE2Q86Y30 109 aa10.97□□□□□ -0.65
TSPAN3-204ENST00000558394 CARD19Q96LW7 228 aa10.96□□□□□ -0.65
TSPAN3-204ENST00000558394 NIT2Q9NQR4 276 aa10.96□□□□□ -0.65
TSPAN3-204ENST00000558394 MT-ND6P03923 174 aa10.94□□□□□ -0.66
TSPAN3-204ENST00000558394 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
TSPAN3-204ENST00000558394 G3V3Q6 166 aa10.93□□□□□ -0.66
TSPAN3-204ENST00000558394 ARPC5O15511 151 aa10.93□□□□□ -0.66
TSPAN3-204ENST00000558394 PAGE4O60829 102 aa10.93□□□□□ -0.66
TSPAN3-204ENST00000558394 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
TSPAN3-204ENST00000558394 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
TSPAN3-204ENST00000558394 IGHV1-58A0A0C4DH39 117 aa10.92□□□□□ -0.66
TSPAN3-204ENST00000558394 PFDN1O60925 122 aa10.92□□□□□ -0.66
TSPAN3-204ENST00000558394 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
TSPAN3-204ENST00000558394 MUC2Q02817 5179 aa10.92□□□□□ -0.66
TSPAN3-204ENST00000558394 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
TSPAN3-204ENST00000558394 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
TSPAN3-204ENST00000558394 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
TSPAN3-204ENST00000558394 FOXI1Q12951 378 aa10.91□□□□□ -0.66
TSPAN3-204ENST00000558394 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
TSPAN3-204ENST00000558394 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 XCL1P47992 114 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 SYCNQ0VAF6 134 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 PRR4Q16378 134 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 CYTL1Q9NRR1 136 aa10.9□□□□□ -0.66
TSPAN3-204ENST00000558394 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
TSPAN3-204ENST00000558394 RPS20P60866 119 aaKnown RBP10.89□□□□□ -0.67
TSPAN3-204ENST00000558394 C1orf137Q5JT78 98 aa10.89□□□□□ -0.67
TSPAN3-204ENST00000558394 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
TSPAN3-204ENST00000558394 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
TSPAN3-204ENST00000558394 ISOC2Q96AB3 205 aa10.88□□□□□ -0.67
TSPAN3-204ENST00000558394 F2Z2F3 143 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 H7C423 109 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 RGS21Q2M5E4 152 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 TMUB2Q71RG4 321 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 BTF3L4Q96K17 158 aa10.87□□□□□ -0.67
TSPAN3-204ENST00000558394 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 IGKV2-29A2NJV5 120 aaPredicted RBP10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 CCL25O15444 150 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 NCR2O95944 276 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 APCSP02743 223 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 FGF6P10767 208 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 NTF3P20783 257 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
TSPAN3-204ENST00000558394 CAMPP49913 170 aa10.85□□□□□ -0.67
TSPAN3-204ENST00000558394 ZNF345Q14585 488 aa10.85□□□□□ -0.67
TSPAN3-204ENST00000558394 FAM213BQ8TBF2 198 aa10.85□□□□□ -0.67
TSPAN3-204ENST00000558394 A0A1B0GV50 99 aa10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 ZNF25P17030 456 aaPredicted RBP10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 SS18Q15532 418 aa10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 Q6ZNX1 250 aa10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
TSPAN3-204ENST00000558394 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
TSPAN3-204ENST00000558394 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
TSPAN3-204ENST00000558394 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
TSPAN3-204ENST00000558394 KCNRGQ8N5I3 272 aa10.83□□□□□ -0.68
TSPAN3-204ENST00000558394 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
TSPAN3-204ENST00000558394 EIF5AP63241 154 aaKnown RBP10.82□□□□□ -0.68
TSPAN3-204ENST00000558394 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
TSPAN3-204ENST00000558394 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 IFNA1P01562 189 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 BCL2P10415 239 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 UBE2D1P51668 147 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 EIF5AL1Q6IS14 154 aaKnown RBP10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
TSPAN3-204ENST00000558394 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 APOMO95445 188 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 MALP21145 153 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 TWIST1Q15672 202 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 CD164L2Q6UWJ8 174 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 GATD1Q8NB37 220 aa10.8□□□□□ -0.68
TSPAN3-204ENST00000558394 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 KANTRA0A1W2PQU2 76 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 H0Y9J4 135 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 BCL2L11O43521 198 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 CENPWQ5EE01 88 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 CAMK2N2Q96S95 79 aa10.79□□□□□ -0.68
TSPAN3-204ENST00000558394 NUP35Q8NFH5 326 aa10.78□□□□□ -0.68
TSPAN3-204ENST00000558394 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms