RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
SNX1-203ENST00000558040 NUDT3O95989 172 aa11.74□□□□□ -0.53
SNX1-203ENST00000558040 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
SNX1-203ENST00000558040 NUPR1O60356 82 aa11.73□□□□□ -0.53
SNX1-203ENST00000558040 S100A2P29034 98 aa11.73□□□□□ -0.53
SNX1-203ENST00000558040 AMTP48728 403 aa11.73□□□□□ -0.53
SNX1-203ENST00000558040 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
SNX1-203ENST00000558040 HBDP02042 147 aa11.72□□□□□ -0.53
SNX1-203ENST00000558040 DEFB104AQ8WTQ1 72 aa11.72□□□□□ -0.53
SNX1-203ENST00000558040 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 LINC01549A6NIU2 74 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 IGLL5B9A064 214 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.53
SNX1-203ENST00000558040 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
SNX1-203ENST00000558040 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 FAM19A2Q8N3H0 131 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 TMEM18Q96B42 140 aa11.71□□□□□ -0.53
SNX1-203ENST00000558040 PRKDCP78527 4128 aaKnown RBP11.71□□□□□ -0.54
SNX1-203ENST00000558040 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
SNX1-203ENST00000558040 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
SNX1-203ENST00000558040 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
SNX1-203ENST00000558040 TIRAPP58753 221 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 PACRGQ96M98 296 aaPredicted RBP11.69□□□□□ -0.54
SNX1-203ENST00000558040 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
SNX1-203ENST00000558040 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
SNX1-203ENST00000558040 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
SNX1-203ENST00000558040 A0A096LNJ9 63 aa11.67□□□□□ -0.54
SNX1-203ENST00000558040 UBE2L6O14933 153 aa11.67□□□□□ -0.54
SNX1-203ENST00000558040 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
SNX1-203ENST00000558040 H7C423 109 aa11.66□□□□□ -0.54
SNX1-203ENST00000558040 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
SNX1-203ENST00000558040 LELP1Q5T871 98 aa11.66□□□□□ -0.54
SNX1-203ENST00000558040 WWC2-AS2Q96NR7 200 aa11.66□□□□□ -0.54
SNX1-203ENST00000558040 HSPB8Q9UJY1 196 aa11.66□□□□□ -0.54
SNX1-203ENST00000558040 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 COL7A1Q02388 2944 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.65□□□□□ -0.54
SNX1-203ENST00000558040 IGKV2-29A2NJV5 120 aaPredicted RBP11.65□□□□□ -0.54
SNX1-203ENST00000558040 FABP4P15090 132 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 TCTAP57738 103 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
SNX1-203ENST00000558040 ATP5LO75964 103 aa11.64□□□□□ -0.55
SNX1-203ENST00000558040 PKIAP61925 76 aa11.64□□□□□ -0.55
SNX1-203ENST00000558040 RPL39P62891 51 aaKnown RBP11.64□□□□□ -0.55
SNX1-203ENST00000558040 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
SNX1-203ENST00000558040 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
SNX1-203ENST00000558040 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
SNX1-203ENST00000558040 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
SNX1-203ENST00000558040 ERASQ7Z444 233 aa11.63□□□□□ -0.55
SNX1-203ENST00000558040 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
SNX1-203ENST00000558040 IFITM10A6NMD0 228 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 CCL18P55774 89 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 ESRGQ1W209 222 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 TMEM141Q96I45 108 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 TIMM21Q9BVV7 248 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 PYGO1Q9Y3Y4 419 aa11.62□□□□□ -0.55
SNX1-203ENST00000558040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
SNX1-203ENST00000558040 NPSP0C0P6 89 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 FGF6P10767 208 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
SNX1-203ENST00000558040 GAGE6Q13070 117 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
SNX1-203ENST00000558040 IFI27L1Q96BM0 104 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 APLNQ9ULZ1 77 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
SNX1-203ENST00000558040 IGIPA6NJ69 53 aa11.6□□□□□ -0.55
SNX1-203ENST00000558040 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
SNX1-203ENST00000558040 ZFAND6Q6FIF0 208 aa11.6□□□□□ -0.55
SNX1-203ENST00000558040 TMEM101Q96IK0 257 aa11.6□□□□□ -0.55
SNX1-203ENST00000558040 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
SNX1-203ENST00000558040 CSDC2Q9Y534 153 aaKnown RBP11.6□□□□□ -0.55
SNX1-203ENST00000558040 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
SNX1-203ENST00000558040 Q6ZN92 141 aa11.59□□□□□ -0.55
SNX1-203ENST00000558040 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
SNX1-203ENST00000558040 LINC00173Q6ZV60 143 aa11.58□□□□□ -0.56
SNX1-203ENST00000558040 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
SNX1-203ENST00000558040 A0A087WX48 190 aa11.57□□□□□ -0.56
SNX1-203ENST00000558040 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
SNX1-203ENST00000558040 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
SNX1-203ENST00000558040 IGLV4-3A0A075B6K6 122 aa11.56□□□□□ -0.56
SNX1-203ENST00000558040 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
SNX1-203ENST00000558040 PRSS1P07477 247 aa11.56□□□□□ -0.56
SNX1-203ENST00000558040 KRTDAPP60985 99 aa11.56□□□□□ -0.56
SNX1-203ENST00000558040 LINC00588Q9Y4M8 146 aa11.56□□□□□ -0.56
SNX1-203ENST00000558040 RBX1P62877 108 aa11.55□□□□□ -0.56
SNX1-203ENST00000558040 MPV17L2Q567V2 206 aa11.55□□□□□ -0.56
SNX1-203ENST00000558040 UBE2DNLQ8IWF7 75 aa11.55□□□□□ -0.56
SNX1-203ENST00000558040 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
SNX1-203ENST00000558040 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms