RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 UQCRHP07919 91 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 CBLN1P23435 193 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 NPC2P61916 151 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 UBE2G1P62253 170 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 SPRNQ5BIV9 151 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 C9orf116Q5BN46 136 aaPredicted RBP1.7□□□□□ -2.14
TDP1-217ENST00000557782 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
TDP1-217ENST00000557782 LINC00526Q96FQ7 95 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 C22orf24Q9Y442 160 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 A0A1B0GUL6 1792 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 LAMB1P07942 1786 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 ANKRD36CQ5JPF3 1778 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 PAPPAQ13219 1627 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 NHSL1Q5SYE7 1610 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 PKD1L3Q7Z443 1732 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 ARAP2Q8WZ64 1704 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 DOCK2Q92608 1830 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 TCRBV3S1A0A5B6 114 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 IFNA17P01571 189 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 IGLV3-1P01715 115 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 IFITM1P13164 125 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 IL9P15248 144 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 S100A7L2Q5SY68 101 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 C10orf105Q8TEF2 133 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 MRPL35Q9NZE8 188 aaKnown RBP1.69□□□□□ -2.14
TDP1-217ENST00000557782 ZNF142P52746 1687 aaPredicted RBP1.69□□□□□ -2.14
TDP1-217ENST00000557782 SLIT1O75093 1534 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 NFAT5O94916 1531 aa1.69□□□□□ -2.14
TDP1-217ENST00000557782 BCORQ6W2J9 1755 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 RBBP6Q7Z6E9 1792 aaKnown RBP1.68□□□□□ -2.14
TDP1-217ENST00000557782 DLEC1Q9Y238 1755 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 FAM24AA6NFZ4 105 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 HIGD1CA8MV81 97 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 M0R143 59 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 CCKP06307 115 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 ABCA3Q99758 1704 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 PXDNQ92626 1479 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 WNK3Q9BYP7 1800 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 CACNA1AO00555 2505 aa1.68□□□□□ -2.14
TDP1-217ENST00000557782 PLCH1Q4KWH8 1693 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 SNRNP200O75643 2136 aaKnown RBP1.67□□□□□ -2.14
TDP1-217ENST00000557782 MUC22E2RYF6 1773 aaPredicted RBP1.67□□□□□ -2.14
TDP1-217ENST00000557782 TIAM2Q8IVF5 1701 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 TOGARAM1Q9Y4F4 1720 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 IGKV2-40A0A087WW87 121 aaPredicted RBP1.67□□□□□ -2.14
TDP1-217ENST00000557782 OOSP1A8MZH6 123 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 IGKV2D-40P01614 121 aaPredicted RBP1.67□□□□□ -2.14
TDP1-217ENST00000557782 TFF1P04155 84 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 SPINK8P0C7L1 97 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 Q8N8P6 123 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 IFI27L1Q96BM0 104 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 AQP10Q96PS8 301 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 SRCAPQ6ZRS2 3230 aa1.67□□□□□ -2.14
TDP1-217ENST00000557782 KIAA1551Q9HCM1 1747 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 INSL4Q14641 139 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 C4orf33Q8N1A6 199 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 SCN7AQ01118 1682 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 RREB1Q92766 1687 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 PKD1L2Q7Z442 2459 aa1.66□□□□□ -2.14
TDP1-217ENST00000557782 ROBO1Q9Y6N7 1651 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 TRAV12-3A0A0B4J271 114 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 TRBV10-3A0A0K0K1G6 114 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 RPL37AP61513 92 aaKnown RBP1.65□□□□□ -2.15
TDP1-217ENST00000557782 RBM3P98179 157 aaKnown RBP1.65□□□□□ -2.15
TDP1-217ENST00000557782 PP632Q6XCG6 107 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 SPTSSBQ8NFR3 76 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 MYH4Q9Y623 1939 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 SBF2Q86WG5 1849 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 LRP6O75581 1613 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 ZNF609O15014 1411 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 ANKARQ7Z5J8 1434 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 DOCK1Q14185 1865 aa1.65□□□□□ -2.15
TDP1-217ENST00000557782 KIAA0100Q14667 2235 aaKnown RBP1.64□□□□□ -2.15
TDP1-217ENST00000557782 SPAG17Q6Q759 2223 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 PARP14Q460N5 1801 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 PATJQ8NI35 1801 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 DOT1LQ8TEK3 1739 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 TEX49A0A1B0GTD5 131 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 S100A10P60903 97 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 PKIAP61925 76 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 CYP2G1PQ6ZSU1 146 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 C5orf38Q86SI9 138 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 TTC9CQ8N5M4 171 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 OBSCN-AS1Q96MR7 158 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 DSCR8Q96T75 97 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 ESPL1Q14674 2120 aa1.64□□□□□ -2.15
TDP1-217ENST00000557782 ARFGEF1Q9Y6D6 1849 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 TET1Q8NFU7 2136 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 CICQ96RK0 1608 aaPredicted RBP1.63□□□□□ -2.15
TDP1-217ENST00000557782 KCPQ6ZWJ8 1503 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 A0A0D9SFI3 127 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 TMEM262E9PQX1 116 aa1.63□□□□□ -2.15
TDP1-217ENST00000557782 SSSCA1O60232 199 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms