RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 LAMTOR2Q9Y2Q5 125 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 TRBV25-1A0A075B6N4 114 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 IQCJQ1A5X6 159 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 IGHV1-24A0A0C4DH33 117 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 AMTP48728 403 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 CHCHD5Q9BSY4 110 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 DNAH6Q9C0G6 4158 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 MAP1LC3AQ9H492 121 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 RYR3Q15413 4870 aa10.39□□□□□ -0.75
NEDD1-213ENST00000557644 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 NIT1Q86X76 327 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 TCAPO15273 167 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 RAB5AP20339 215 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
NEDD1-213ENST00000557644 GAGE6Q13070 117 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 TMEM243Q9BU79 118 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
NEDD1-213ENST00000557644 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
NEDD1-213ENST00000557644 NBDYA0A0U1RRE5 68 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
NEDD1-213ENST00000557644 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 TRGC2P03986 189 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 FCER1GP30273 86 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 LINC01556Q5JQF7 62 aa10.37□□□□□ -0.75
NEDD1-213ENST00000557644 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
NEDD1-213ENST00000557644 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
NEDD1-213ENST00000557644 Q8N976 141 aa10.36□□□□□ -0.75
NEDD1-213ENST00000557644 ESDP10768 282 aa10.35□□□□□ -0.75
NEDD1-213ENST00000557644 DNAH2Q9P225 4427 aa10.35□□□□□ -0.75
NEDD1-213ENST00000557644 A0A087WX48 190 aa10.34□□□□□ -0.75
NEDD1-213ENST00000557644 Q6ZR54 194 aa10.34□□□□□ -0.75
NEDD1-213ENST00000557644 Q8N8P6 123 aa10.34□□□□□ -0.75
NEDD1-213ENST00000557644 UBE2L6O14933 153 aa10.33□□□□□ -0.76
NEDD1-213ENST00000557644 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
NEDD1-213ENST00000557644 RBX1P62877 108 aa10.32□□□□□ -0.76
NEDD1-213ENST00000557644 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
NEDD1-213ENST00000557644 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
NEDD1-213ENST00000557644 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
NEDD1-213ENST00000557644 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
NEDD1-213ENST00000557644 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
NEDD1-213ENST00000557644 TTC32Q5I0X7 151 aa10.31□□□□□ -0.76
NEDD1-213ENST00000557644 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
NEDD1-213ENST00000557644 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
NEDD1-213ENST00000557644 FGF6P10767 208 aa10.31□□□□□ -0.76
NEDD1-213ENST00000557644 C20orf203Q8NBC4 194 aa10.31□□□□□ -0.76
NEDD1-213ENST00000557644 RNASEKQ6P5S7 137 aaKnown RBP10.3□□□□□ -0.76
NEDD1-213ENST00000557644 ANGP03950 147 aaKnown RBP10.3□□□□□ -0.76
NEDD1-213ENST00000557644 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
NEDD1-213ENST00000557644 AMMECR1LQ6DCA0 310 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 A0A1B0GUV1 79 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 H7C423 109 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 PKIAP61925 76 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 LAGE3Q14657 143 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
NEDD1-213ENST00000557644 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 Q9HAA7 133 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 FRAS1Q86XX4 4008 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 K7EP13 123 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
NEDD1-213ENST00000557644 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
NEDD1-213ENST00000557644 UBE2WQ96B02 151 aa10.27□□□□□ -0.77
NEDD1-213ENST00000557644 LINC01546A6NGU7 62 aa10.26□□□□□ -0.77
NEDD1-213ENST00000557644 MRPL52Q86TS9 123 aaKnown RBP10.26□□□□□ -0.77
NEDD1-213ENST00000557644 K7EMI3 77 aa10.26□□□□□ -0.77
NEDD1-213ENST00000557644 LINC00614P0C842 121 aa10.26□□□□□ -0.77
NEDD1-213ENST00000557644 BTF3P20290 206 aaKnown RBP10.26□□□□□ -0.77
NEDD1-213ENST00000557644 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
NEDD1-213ENST00000557644 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 C6orf223Q8N319 242 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 TMEM18Q96B42 140 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 AP5S1Q9NUS5 200 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-213ENST00000557644 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
NEDD1-213ENST00000557644 OR5A1Q8NGJ0 315 aa10.25□□□□□ -0.77
NEDD1-213ENST00000557644 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-213ENST00000557644 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 REG3AQ06141 175 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 PMCHL1Q16048 86 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 DGAT2L7PQ6IED9 249 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 FAM104AQ969W3 186 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 CYSLTR1Q9Y271 337 aa10.24□□□□□ -0.77
NEDD1-213ENST00000557644 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 RTL8CO15255 209 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 Q0VG73 95 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 Q6ZUT4 128 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms