RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 C5orf17Q8NAS9 161 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 DEFB104AQ8WTQ1 72 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
VPS33B-207ENST00000557470 ODF3Q96PU9 254 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SLC50A1Q9BRV3 221 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SS18L2Q9UHA2 77 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 PRO0255Q9UI72 69 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 C7orf71A4D174 169 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 A6NDN8 102 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 KLLNB2CW77 178 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 H3BQ15 152 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 K7EQD1 137 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 PSCAO43653 123 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 SLC25A5P05141 298 aaKnown RBP3.9□□□□□ -1.79
VPS33B-207ENST00000557470 IGLC2P0DOY2 106 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 TCL1AP56279 114 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 H2BFSP57053 126 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 ERCC8Q13216 396 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 Q6ZN92 141 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 LINC00305Q7Z4B0 112 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 BPIFA4PQ86YQ2 179 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 Q8N814 137 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 OR10G4Q8NGN3 311 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 OR10G8Q8NGN5 311 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 PRSS3P2Q8NHM4 247 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 TMED6Q8WW62 240 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 TVP23CQ96ET8 276 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 AP1S3Q96PC3 154 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 VGLL1Q99990 258 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 DERL1Q9BUN8 251 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 Q9UF83 564 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 TP53TG3Q9ULZ0 132 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 HHLA3Q9XRX5 114 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 PXMP4Q9Y6I8 212 aa3.9□□□□□ -1.79
VPS33B-207ENST00000557470 PIGBOS1A0A0B4J2F0 54 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 A0A1B0GWB2 263 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 AGPAT2O15120 278 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 COX7A2P2O60397 106 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 TSHBP01222 138 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 SRIP30626 198 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 RNASE4P34096 147 aaKnown RBP3.89□□□□□ -1.79
VPS33B-207ENST00000557470 ADIRFQ15847 76 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 PMCHL1Q16048 86 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 IBA57Q5T440 356 aaKnown RBP3.89□□□□□ -1.79
VPS33B-207ENST00000557470 Q6ZQT7 251 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 Q6ZSA8 131 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 FAM19A1Q7Z5A9 133 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 RASL10AQ92737 203 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 FAM19A4Q96LR4 140 aa3.89□□□□□ -1.79
VPS33B-207ENST00000557470 MRPL32Q9BYC8 188 aaKnown RBP3.89□□□□□ -1.79
VPS33B-207ENST00000557470 EIF5A2Q9GZV4 153 aaKnown RBP3.89□□□□□ -1.79
VPS33B-207ENST00000557470 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 TRGV4A0A0C4DH28 118 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 MAP1LC3B2A6NCE7 125 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 E9PLD3 99 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 M0R3E3 92 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 SSSCA1O60232 199 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 PRSS2P07478 247 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 KRTAP10-4P60372 401 aaPredicted RBP3.88□□□□□ -1.79
VPS33B-207ENST00000557470 CD164Q04900 197 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 IL15RAQ13261 267 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 PRR9Q5T870 116 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 ANAPC13Q9BS18 74 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 SPANXDQ9BXN6 97 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 MAP1LC3BQ9GZQ8 125 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 GTSF1LQ9H1H1 148 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 NPVFQ9HCQ7 196 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 PSENENQ9NZ42 101 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 NAT8BQ9UHF3 227 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 TRAV5A0A0B4J249 113 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV3-38A0A0C4DH36 116 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 FNDC10F2Z333 226 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.87□□□□□ -1.79
VPS33B-207ENST00000557470 GPX1P07203 203 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 CXCL1P09341 107 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 SEC11BP0C7V7 166 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 CRISP2P16562 243 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 SEC11AP67812 179 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 MEF2BQ02080 365 aaPredicted RBP3.87□□□□□ -1.79
VPS33B-207ENST00000557470 WFDC2Q14508 124 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 ZNF266Q14584 549 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 C10orf113Q5VZT2 155 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 TMEM14EPQ6UXP3 125 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 ZFAND2AQ8N6M9 145 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 OR10P1Q8NGE3 313 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 OR2G3Q8NGZ4 309 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 DNAJC30Q96LL9 226 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 AQP10Q96PS8 301 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 MGST2Q99735 147 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 SAMD10Q9BYL1 202 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms