RNA–Protein interactions for RNA: ENST00000557378.5

BEGAIN-210, Transcript of brain enriched guanylate kinase associated, human

TSL 1 (best)

Gene BEGAIN, Length 649 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEGAIN-210	ENST00000557378	GATD1	Q8NB37	220 aa		13.64	□□□□□ -0.23
BEGAIN-210	ENST00000557378	CHAC1	Q9BUX1	264 aa		13.64	□□□□□ -0.23
BEGAIN-210	ENST00000557378	GFRA4	Q9GZZ7	299 aa		13.64	□□□□□ -0.23
BEGAIN-210	ENST00000557378	IGLV4-60	A0A075B6I1	120 aa		13.63	□□□□□ -0.23
BEGAIN-210	ENST00000557378	IGLV10-54	A0A075B6I4	117 aa		13.62	□□□□□ -0.23
BEGAIN-210	ENST00000557378		A0A1B0GUV1	79 aa		13.62	□□□□□ -0.23
BEGAIN-210	ENST00000557378	FOXA3	P55318	350 aa	Predicted RBP	13.62	□□□□□ -0.23
BEGAIN-210	ENST00000557378	FAM231D	Q6ZW35	169 aa		13.62	□□□□□ -0.23
BEGAIN-210	ENST00000557378	CIRBP-AS1	Q8TBR5	109 aa		13.61	□□□□□ -0.23
BEGAIN-210	ENST00000557378	GATC	O43716	136 aa	Known RBP	13.6	□□□□□ -0.23
BEGAIN-210	ENST00000557378	PLA2G1B	P04054	148 aa	Known RBP	13.6	□□□□□ -0.23
BEGAIN-210	ENST00000557378	COTL1	Q14019	142 aa		13.6	□□□□□ -0.23
BEGAIN-210	ENST00000557378	RPL39L	Q96EH5	51 aa	Known RBP	13.6	□□□□□ -0.23
BEGAIN-210	ENST00000557378	AMT	P48728	403 aa		13.59	□□□□□ -0.23
BEGAIN-210	ENST00000557378	CEBPG	P53567	150 aa		13.59	□□□□□ -0.23
BEGAIN-210	ENST00000557378	KRTAP10-4	P60372	401 aa	Predicted RBP	13.58	□□□□□ -0.24
BEGAIN-210	ENST00000557378		A0A1B0GVG6	124 aa		13.57	□□□□□ -0.24
BEGAIN-210	ENST00000557378		A8MWL6	223 aa		13.57	□□□□□ -0.24
BEGAIN-210	ENST00000557378	CT83	Q5H943	113 aa		13.57	□□□□□ -0.24
BEGAIN-210	ENST00000557378	DGAT2L7P	Q6IED9	249 aa		13.57	□□□□□ -0.24
BEGAIN-210	ENST00000557378	TRAV8-4	A0A0B4J246	113 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	UBE2L6	O14933	153 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	LINC01551	Q86U37	167 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	C9orf163	Q8N9P6	203 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	FAM210A	Q96ND0	272 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	SMIM7	Q9BQ49	75 aa		13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	EIF5A2	Q9GZV4	153 aa	Known RBP	13.56	□□□□□ -0.24
BEGAIN-210	ENST00000557378	NDUFS6	O75380	124 aa	Known RBP	13.55	□□□□□ -0.24
BEGAIN-210	ENST00000557378	PKHD1L1	Q86WI1	4243 aa		13.55	□□□□□ -0.24
BEGAIN-210	ENST00000557378	LRP1	Q07954	4544 aa	Known RBP	13.54	□□□□□ -0.24
BEGAIN-210	ENST00000557378	SMIM15	Q7Z3B0	74 aa		13.54	□□□□□ -0.24
BEGAIN-210	ENST00000557378	SDHAF1	A6NFY7	115 aa		13.53	□□□□□ -0.24
BEGAIN-210	ENST00000557378	GAS8-AS1	O95177	125 aa		13.53	□□□□□ -0.24
BEGAIN-210	ENST00000557378	SRP19	P09132	144 aa	Known RBP	13.53	□□□□□ -0.24
BEGAIN-210	ENST00000557378	CLRN3	Q8NCR9	226 aa		13.53	□□□□□ -0.24
BEGAIN-210	ENST00000557378	PANO1	I0J062	215 aa		13.52	□□□□□ -0.25
BEGAIN-210	ENST00000557378	TEX261	Q6UWH6	196 aa		13.52	□□□□□ -0.25
BEGAIN-210	ENST00000557378	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.52	□□□□□ -0.25
BEGAIN-210	ENST00000557378	ZNF727	A8MUV8	499 aa		13.51	□□□□□ -0.25
BEGAIN-210	ENST00000557378	HIGD1C	A8MV81	97 aa		13.51	□□□□□ -0.25
BEGAIN-210	ENST00000557378	NCR2	O95944	276 aa		13.51	□□□□□ -0.25
BEGAIN-210	ENST00000557378	CNBP	P62633	177 aa	Known RBP	13.51	□□□□□ -0.25
BEGAIN-210	ENST00000557378	TSKU	Q8WUA8	353 aa		13.51	□□□□□ -0.25
BEGAIN-210	ENST00000557378	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	TRBV6-5	A0A0K0K1A5	114 aa		13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	hDV102S1	A0JD36	115 aa		13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	SLPI	P03973	132 aa		13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	SDIM1	Q6ZPB5	146 aa		13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378	OSTC	Q9NRP0	149 aa		13.5	□□□□□ -0.25
BEGAIN-210	ENST00000557378		A0A1B0GUT8	65 aa		13.49	□□□□□ -0.25
BEGAIN-210	ENST00000557378	FAM231B	A6NCW3	169 aa		13.49	□□□□□ -0.25
BEGAIN-210	ENST00000557378	APCS	P02743	223 aa		13.49	□□□□□ -0.25
BEGAIN-210	ENST00000557378	FAT3	Q8TDW7	4589 aa		13.49	□□□□□ -0.25
BEGAIN-210	ENST00000557378	C15orf56	Q8N910	161 aa		13.48	□□□□□ -0.25
BEGAIN-210	ENST00000557378	BORCS7	Q96B45	105 aa		13.48	□□□□□ -0.25
BEGAIN-210	ENST00000557378	RNF185	Q96GF1	192 aa		13.48	□□□□□ -0.25
BEGAIN-210	ENST00000557378	TMEM191A	Q9H0A3	160 aa		13.48	□□□□□ -0.25
BEGAIN-210	ENST00000557378	IGKV3OR2-268	A0A0C4DH90	116 aa		13.47	□□□□□ -0.25
BEGAIN-210	ENST00000557378		H7C423	109 aa		13.47	□□□□□ -0.25
BEGAIN-210	ENST00000557378	FGF6	P10767	208 aa		13.47	□□□□□ -0.25
BEGAIN-210	ENST00000557378	AMMECR1L	Q6DCA0	310 aa		13.47	□□□□□ -0.25
BEGAIN-210	ENST00000557378		V9GYV3	84 aa		13.47	□□□□□ -0.25
BEGAIN-210	ENST00000557378	GAGE12H	A6NDE8	117 aa		13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378		I3L3M4	83 aa		13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378	TSHB	P01222	138 aa		13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378	RPS10	P46783	165 aa	Known RBP	13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378	RNASEK	Q6P5S7	137 aa	Known RBP	13.46	□□□□□ -0.25
BEGAIN-210	ENST00000557378		J3QL48	77 aa		13.45	□□□□□ -0.26
BEGAIN-210	ENST00000557378	RAB4A	P20338	218 aa		13.45	□□□□□ -0.26
BEGAIN-210	ENST00000557378	PMCH	P20382	165 aa		13.45	□□□□□ -0.26
BEGAIN-210	ENST00000557378	ISOC2	Q96AB3	205 aa		13.45	□□□□□ -0.26
BEGAIN-210	ENST00000557378		C9JQL5	133 aa		13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	ESD	P10768	282 aa		13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	CIRBP	Q14011	172 aa	Known RBP	13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	AMN1	Q8IY45	258 aa		13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	ST20	Q9HBF5	79 aa		13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	TMEM242	Q9NWH2	141 aa		13.44	□□□□□ -0.26
BEGAIN-210	ENST00000557378	POLR2K	P53803	58 aa	Known RBP	13.43	□□□□□ -0.26
BEGAIN-210	ENST00000557378	NUP35	Q8NFH5	326 aa		13.43	□□□□□ -0.26
BEGAIN-210	ENST00000557378	AP5S1	Q9NUS5	200 aa		13.43	□□□□□ -0.26
BEGAIN-210	ENST00000557378	ZNF25	P17030	456 aa	Predicted RBP	13.42	□□□□□ -0.26
BEGAIN-210	ENST00000557378	RPL23	P62829	140 aa	Known RBP	13.42	□□□□□ -0.26
BEGAIN-210	ENST00000557378	TMEM241	Q24JQ0	296 aa		13.42	□□□□□ -0.26
BEGAIN-210	ENST00000557378	MRAP2	Q96G30	205 aa		13.42	□□□□□ -0.26
BEGAIN-210	ENST00000557378	IGHV3-64	A0A075B6Q5	118 aa		13.41	□□□□□ -0.26
BEGAIN-210	ENST00000557378	RPL37A	P61513	92 aa	Known RBP	13.41	□□□□□ -0.26
BEGAIN-210	ENST00000557378	SRSF3	P84103	164 aa	Known RBP	13.41	□□□□□ -0.26
BEGAIN-210	ENST00000557378	FAM74A3	Q4VXF1	159 aa		13.41	□□□□□ -0.26
BEGAIN-210	ENST00000557378	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.4	□□□□□ -0.26
BEGAIN-210	ENST00000557378	TRBV27	A0A0K0K1C4	114 aa		13.4	□□□□□ -0.26
BEGAIN-210	ENST00000557378	SMKR1	H3BMG3	65 aa		13.4	□□□□□ -0.26
BEGAIN-210	ENST00000557378	CHTF8	P0CG12	524 aa		13.4	□□□□□ -0.26
BEGAIN-210	ENST00000557378	OR5A1	Q8NGJ0	315 aa		13.4	□□□□□ -0.26
BEGAIN-210	ENST00000557378	HNRNPA3	P51991	378 aa	Known RBP	13.39	□□□□□ -0.27
BEGAIN-210	ENST00000557378	FOXI1	Q12951	378 aa		13.39	□□□□□ -0.27
BEGAIN-210	ENST00000557378	HIGD2B	Q4VC39	106 aa		13.39	□□□□□ -0.27
BEGAIN-210	ENST00000557378	RIG	Q13278	110 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms