RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 NIT2Q9NQR4 276 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 UBE2L6O14933 153 aa7.55□□□□□ -1.2
PSEN1-221ENST00000557293 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
PSEN1-221ENST00000557293 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
PSEN1-221ENST00000557293 Q5BKY6 102 aa7.55□□□□□ -1.2
PSEN1-221ENST00000557293 TCEAL7Q9BRU2 100 aa7.55□□□□□ -1.2
PSEN1-221ENST00000557293 UPK1BO75841 260 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 GAGE2BQ13066 116 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 COTL1Q14019 142 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 C1orf137Q5JT78 98 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 MED28Q9H204 178 aa7.54□□□□□ -1.2
PSEN1-221ENST00000557293 IGHV1-58A0A0C4DH39 117 aa7.53□□□□□ -1.2
PSEN1-221ENST00000557293 MT-ND6P03923 174 aa7.53□□□□□ -1.2
PSEN1-221ENST00000557293 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
PSEN1-221ENST00000557293 C9orf116Q5BN46 136 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-221ENST00000557293 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
PSEN1-221ENST00000557293 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
PSEN1-221ENST00000557293 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 PAGE4O60829 102 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 S100A9P06702 114 aaKnown RBP7.52□□□□□ -1.21
PSEN1-221ENST00000557293 NTF3P20783 257 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 XCL1P47992 114 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 Q6ZNX1 250 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 FER1L6-AS1Q8NA97 138 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 DIRC1Q969H9 104 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
PSEN1-221ENST00000557293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-221ENST00000557293 LOC107984640A0A0U1RRK4 108 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-221ENST00000557293 H0Y9J4 135 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 CCL25O15444 150 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 STOML3Q8TAV4 291 aa7.51□□□□□ -1.21
PSEN1-221ENST00000557293 BCL2P10415 239 aa7.5□□□□□ -1.21
PSEN1-221ENST00000557293 FGF6P10767 208 aa7.5□□□□□ -1.21
PSEN1-221ENST00000557293 BATF3Q9NR55 127 aa7.5□□□□□ -1.21
PSEN1-221ENST00000557293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-221ENST00000557293 H7C423 109 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 MEF2BQ02080 365 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-221ENST00000557293 AKR1C8PQ5T2L2 129 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 AMMECR1LQ6DCA0 310 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 RNASEKQ6P5S7 137 aaKnown RBP7.49□□□□□ -1.21
PSEN1-221ENST00000557293 TMUB2Q71RG4 321 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 GATD1Q8NB37 220 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 NUP35Q8NFH5 326 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 S100ZQ8WXG8 99 aa7.49□□□□□ -1.21
PSEN1-221ENST00000557293 IGLV4-69A0A075B6H9 119 aa7.48□□□□□ -1.21
PSEN1-221ENST00000557293 ZNF561-AS1K7EIQ3 104 aa7.48□□□□□ -1.21
PSEN1-221ENST00000557293 CAMPP49913 170 aa7.48□□□□□ -1.21
PSEN1-221ENST00000557293 TPPP3Q9BW30 176 aa7.48□□□□□ -1.21
PSEN1-221ENST00000557293 BORCS7-ASMTA0A0B4J1R7 106 aa7.47□□□□□ -1.21
PSEN1-221ENST00000557293 C19orf71A6NCJ1 209 aa7.47□□□□□ -1.21
PSEN1-221ENST00000557293 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-221ENST00000557293 LYZL1Q6UWQ5 148 aa7.47□□□□□ -1.21
PSEN1-221ENST00000557293 CYTL1Q9NRR1 136 aa7.47□□□□□ -1.21
PSEN1-221ENST00000557293 NCR2O95944 276 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 CD164L2Q6UWJ8 174 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 MBD3L1Q8WWY6 194 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
PSEN1-221ENST00000557293 NDUFA13Q9P0J0 144 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 ALG5Q9Y673 324 aa7.46□□□□□ -1.22
PSEN1-221ENST00000557293 F2Z2F3 143 aa7.45□□□□□ -1.22
PSEN1-221ENST00000557293 APOMO95445 188 aa7.45□□□□□ -1.22
PSEN1-221ENST00000557293 TRGC1P0CF51 173 aa7.45□□□□□ -1.22
PSEN1-221ENST00000557293 ESDP10768 282 aa7.45□□□□□ -1.22
PSEN1-221ENST00000557293 ZNF25P17030 456 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-221ENST00000557293 DEFA1P59665 94 aa7.45□□□□□ -1.22
PSEN1-221ENST00000557293 RPS20P60866 119 aaKnown RBP7.45□□□□□ -1.22
PSEN1-221ENST00000557293 A0A087WZ39 114 aa7.44□□□□□ -1.22
PSEN1-221ENST00000557293 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
PSEN1-221ENST00000557293 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
PSEN1-221ENST00000557293 C9orf62Q8N4C0 152 aa7.44□□□□□ -1.22
PSEN1-221ENST00000557293 OPRPNQ99935 248 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-221ENST00000557293 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
PSEN1-221ENST00000557293 CRCT1Q9UGL9 99 aa7.44□□□□□ -1.22
PSEN1-221ENST00000557293 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 APCSP02743 223 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 SS18Q15532 418 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
PSEN1-221ENST00000557293 TRAV1-1A0A0B4J248 108 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 SDHAF1A6NFY7 115 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 BCL2L11O43521 198 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 TSPAN13O95857 204 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-221ENST00000557293 EIF5AP63241 154 aaKnown RBP7.42□□□□□ -1.22
PSEN1-221ENST00000557293 RNF151Q2KHN1 245 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
PSEN1-221ENST00000557293 FXYD6-FXYD2A0A087WZ82 144 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms