RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KRTAP10-3P60369 221 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 ZNF415Q09FC8 603 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 LGALS9BQ3B8N2 356 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 SPATA45Q537H7 98 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 LBHQ53QV2 105 aaPredicted RBP3.22□□□□□ -1.89
SRP54-212ENST00000556992 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 LGALS9CQ6DKI2 356 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 HIST2H2BDQ6DRA6 164 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 MRPL52Q86TS9 123 aaKnown RBP3.22□□□□□ -1.89
SRP54-212ENST00000556992 KIR2DL5AQ8N109 375 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 TMEM158Q8WZ71 300 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 SCGB3A1Q96QR1 104 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 KIR2DL4Q99706 377 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 CSTL1Q9H114 145 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 XCL2Q9UBD3 114 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 UQCR10Q9UDW1 63 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 PAM16Q9Y3D7 125 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 GOLT1BQ9Y3E0 138 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 SONP18583 2426 aaKnown RBP3.21□□□□□ -1.9
SRP54-212ENST00000556992 A0A096LNJ9 63 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 TRBV27A0A0K0K1C4 114 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 M0R143 59 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 CIDEAO60543 219 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 PRSS2P07478 247 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 RBMY1A1P0DJD3 496 aaKnown RBP3.21□□□□□ -1.9
SRP54-212ENST00000556992 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 IGLC3P0DOY3 106 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 POLR2KP53803 58 aaKnown RBP3.21□□□□□ -1.9
SRP54-212ENST00000556992 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.9
SRP54-212ENST00000556992 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 FAM74A4Q5TZK3 123 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 ZFP2Q6ZN57 461 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 GTSCR1Q86UQ5 136 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 ATOH7Q8N100 152 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 C1orf158Q8N1D5 194 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 WFDC9Q8NEX5 89 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 TOMM6Q96B49 74 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 TMEM141Q96I45 108 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 DNAJC30Q96LL9 226 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 PMCHL2Q9BQD1 86 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 JPT2Q9H910 190 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 EDA2RQ9HAV5 297 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 MRPS16Q9Y3D3 137 aaKnown RBP3.21□□□□□ -1.9
SRP54-212ENST00000556992 TENM1Q9UKZ4 2725 aa3.21□□□□□ -1.9
SRP54-212ENST00000556992 BIRC6Q9NR09 4857 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 CMYA5Q8N3K9 4069 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 TRAV12-1A0A0B4J245 112 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 H0Y8G0 127 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 I3L3M4 83 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 RS1O15537 224 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 DPM2O94777 84 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 IGLL1P15814 213 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 DAZ2Q13117 558 aaKnown RBP3.2□□□□□ -1.9
SRP54-212ENST00000556992 ZNF56Q15929 161 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 CFAP126Q5VTH2 177 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 SLC25A34Q6PIV7 304 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 Q6ZN92 141 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 ERASQ7Z444 233 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 C11orf72Q8NBR9 251 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 RPL39LQ96EH5 51 aaKnown RBP3.2□□□□□ -1.9
SRP54-212ENST00000556992 C14orf144Q96I85 54 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 C18orf15Q96N68 181 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 CITED1Q99966 193 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 CYSLTR1Q9Y271 337 aa3.2□□□□□ -1.9
SRP54-212ENST00000556992 EPPK1P58107 5090 aaKnown RBP3.19□□□□□ -1.9
SRP54-212ENST00000556992 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 A0A087WX48 190 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 hDV102S1A0JD36 115 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 SMIM9A6NGZ8 99 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 IGHV3-53P01767 116 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 IGKCP01834 107 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 RPL35AP18077 110 aaKnown RBP3.19□□□□□ -1.9
SRP54-212ENST00000556992 AZU1P20160 251 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 PLNP26678 52 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 RHOHQ15669 191 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 RRN3P1Q2M238 152 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 MAJINQ3KP22 176 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 PAPPA-AS1Q5QFB9 102 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 UFSP1Q6NVU6 142 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.19□□□□□ -1.9
SRP54-212ENST00000556992 OR4C5Q8NGB2 326 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 TMEM263Q8WUH6 116 aaKnown RBP3.19□□□□□ -1.9
SRP54-212ENST00000556992 C16orf74Q96GX8 76 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 OVOL2Q9BRP0 275 aa3.19□□□□□ -1.9
SRP54-212ENST00000556992 ZMAT5Q9UDW3 170 aaKnown RBP3.19□□□□□ -1.9
SRP54-212ENST00000556992 TRGV1A0A0A0MS02 117 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 TRBV10-1A0A0K0K1A3 114 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 IGIPA6NJ69 53 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 SIVA1O15304 175 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 DLEU1O43261 78 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 PRM2P04554 102 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
SRP54-212ENST00000556992 COX8AP10176 69 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 HNRNPA3P51991 378 aaKnown RBP3.18□□□□□ -1.9
SRP54-212ENST00000556992 CRYBA4P53673 196 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 CTAG1AP78358 180 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms