RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 GAS8-AS1O95177 125 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 KRTAP10-2P60368 255 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 RBX1P62877 108 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 ENHOQ6UWT2 76 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 LINC00862A6NCI5 91 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 CRPP02741 224 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 POLR2KP53803 58 aaKnown RBP7.11□□□□□ -1.27
LINC00239-201ENST00000556973 HBBP68871 147 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 MRPL51Q4U2R6 128 aaKnown RBP7.11□□□□□ -1.27
LINC00239-201ENST00000556973 CDPF1Q6NVV7 123 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
LINC00239-201ENST00000556973 COMMD7Q86VX2 200 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 DEFB104AQ8WTQ1 72 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 SEC11CQ9BY50 192 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
LINC00239-201ENST00000556973 IGKV2D-24A0A075B6R9 120 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 TRBV27A0A0K0K1C4 114 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 A0A1B0GXF2 115 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 H7C423 109 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 VCYO14598 125 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 ADCYAP1P18509 176 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 RPS10P46783 165 aaKnown RBP7.1□□□□□ -1.27
LINC00239-201ENST00000556973 MIAQ16674 131 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 TMEM70Q9BUB7 260 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 PRR34Q9NV39 138 aa7.1□□□□□ -1.27
LINC00239-201ENST00000556973 TRBV24-1A0A075B6N3 115 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 SMKR1H3BMG3 65 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 APCSP02743 223 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 CKS2P33552 79 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 LINC00269Q8N2A0 174 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 Q8N814 137 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 MAPKAPK5-AS1Q8N8E1 139 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 NRACQ8N912 160 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
LINC00239-201ENST00000556973 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 PPBPP02775 128 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
LINC00239-201ENST00000556973 REG3AQ06141 175 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 C20orf203Q8NBC4 194 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 NTN5Q8WTR8 489 aaPredicted RBP7.08□□□□□ -1.28
LINC00239-201ENST00000556973 BTF3L4Q96K17 158 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
LINC00239-201ENST00000556973 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 TSHBP01222 138 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 ESDP10768 282 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 AMMECR1LQ6DCA0 310 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 BAALCQ8WXS3 180 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 TMEM242Q9NWH2 141 aa7.07□□□□□ -1.28
LINC00239-201ENST00000556973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.06□□□□□ -1.28
LINC00239-201ENST00000556973 IGKV2-29A2NJV5 120 aaPredicted RBP7.06□□□□□ -1.28
LINC00239-201ENST00000556973 D6R8Y8 96 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 PHOX2AO14813 284 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 FGF6P10767 208 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 ZNF25P17030 456 aaPredicted RBP7.06□□□□□ -1.28
LINC00239-201ENST00000556973 FCER1GP30273 86 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 FUSP35637 526 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00239-201ENST00000556973 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 KIR2DL4Q99706 377 aa7.06□□□□□ -1.28
LINC00239-201ENST00000556973 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 LECT2O14960 151 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 TCAPO15273 167 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 GCSHP23434 173 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
LINC00239-201ENST00000556973 WFDC2Q14508 124 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 RNASEKQ6P5S7 137 aaKnown RBP7.05□□□□□ -1.28
LINC00239-201ENST00000556973 CLPSL2Q6UWE3 100 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
LINC00239-201ENST00000556973 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
LINC00239-201ENST00000556973 TRAV9-1A0A075B6T8 112 aa7.04□□□□□ -1.28
LINC00239-201ENST00000556973 C7orf77A4D0Y5 90 aa7.04□□□□□ -1.28
LINC00239-201ENST00000556973 MRPL52Q86TS9 123 aaKnown RBP7.04□□□□□ -1.28
LINC00239-201ENST00000556973 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 PRSS47A8MTI9 375 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 NPYP01303 97 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 HLA-DQA1P01909 254 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 S100PP25815 95 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 SMAGPQ0VAQ4 97 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 RHEBQ15382 184 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 C14orf177Q52M58 125 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 TMEM18Q96B42 140 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 PRELID3AQ96N28 172 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 LAMTOR2Q9Y2Q5 125 aa7.03□□□□□ -1.28
LINC00239-201ENST00000556973 DGAT2L7PQ6IED9 249 aa7.02□□□□□ -1.29
LINC00239-201ENST00000556973 CLRN3Q8NCR9 226 aa7.02□□□□□ -1.29
LINC00239-201ENST00000556973 OR5A1Q8NGJ0 315 aa7.02□□□□□ -1.29
LINC00239-201ENST00000556973 SMIM2Q9BVW6 85 aa7.02□□□□□ -1.29
LINC00239-201ENST00000556973 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
LINC00239-201ENST00000556973 CSDC2Q9Y534 153 aaKnown RBP7.02□□□□□ -1.29
LINC00239-201ENST00000556973 DYNC1H1Q14204 4646 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms