RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TSHBP01222 138 aa16.64■□□□□ 0.25
SIX4-203ENST00000556952 LINC00694P0DN24 101 aa16.64■□□□□ 0.25
SIX4-203ENST00000556952 HTN3P15516 51 aa16.64■□□□□ 0.25
SIX4-203ENST00000556952 LOC100131303A0A0U1RQF7 123 aa16.63■□□□□ 0.25
SIX4-203ENST00000556952 NUDT3O95989 172 aa16.63■□□□□ 0.25
SIX4-203ENST00000556952 G0S2P27469 103 aa16.63■□□□□ 0.25
SIX4-203ENST00000556952 GYPEP15421 78 aa16.62■□□□□ 0.25
SIX4-203ENST00000556952 NANOS2P60321 138 aaKnown RBP16.62■□□□□ 0.25
SIX4-203ENST00000556952 LEPROTL1O95214 131 aa16.61■□□□□ 0.25
SIX4-203ENST00000556952 COTL1Q14019 142 aa16.61■□□□□ 0.25
SIX4-203ENST00000556952 PHLDA1Q8WV24 401 aaPredicted RBP16.61■□□□□ 0.25
SIX4-203ENST00000556952 VSIG2Q96IQ7 327 aa16.61■□□□□ 0.25
SIX4-203ENST00000556952 CSMD3Q7Z407 3707 aa16.61■□□□□ 0.25
SIX4-203ENST00000556952 TRAV26-1A0A087WT03 109 aa16.6■□□□□ 0.25
SIX4-203ENST00000556952 BTF3P20290 206 aaKnown RBP16.6■□□□□ 0.25
SIX4-203ENST00000556952 HSPB8Q9UJY1 196 aa16.6■□□□□ 0.25
SIX4-203ENST00000556952 STARD9Q9P2P6 4700 aa16.59■□□□□ 0.25
SIX4-203ENST00000556952 IGHV3-38A0A0C4DH36 116 aa16.59■□□□□ 0.25
SIX4-203ENST00000556952 LINC01549A6NIU2 74 aa16.59■□□□□ 0.25
SIX4-203ENST00000556952 OR10D4PQ8NGN7 298 aa16.59■□□□□ 0.25
SIX4-203ENST00000556952 A0A0J9YY99 117 aa16.58■□□□□ 0.24
SIX4-203ENST00000556952 H3BNG1 76 aa16.57■□□□□ 0.24
SIX4-203ENST00000556952 TOMM6Q96B49 74 aa16.57■□□□□ 0.24
SIX4-203ENST00000556952 GTSF1LQ9H1H1 148 aa16.57■□□□□ 0.24
SIX4-203ENST00000556952 AKR1D1P51857 326 aa16.56■□□□□ 0.24
SIX4-203ENST00000556952 C2orf66Q6UXQ4 117 aa16.56■□□□□ 0.24
SIX4-203ENST00000556952 DEFB104AQ8WTQ1 72 aa16.56■□□□□ 0.24
SIX4-203ENST00000556952 CYSLTR1Q9Y271 337 aa16.56■□□□□ 0.24
SIX4-203ENST00000556952 DEFB131BA0A096LNP1 70 aa16.55■□□□□ 0.24
SIX4-203ENST00000556952 TMEM97Q5BJF2 176 aa16.55■□□□□ 0.24
SIX4-203ENST00000556952 TRAV10A0A0B4J240 114 aa16.55■□□□□ 0.24
SIX4-203ENST00000556952 ATP6V0E2Q8NHE4 81 aa16.55■□□□□ 0.24
SIX4-203ENST00000556952 MRPL23Q16540 153 aaKnown RBP16.54■□□□□ 0.24
SIX4-203ENST00000556952 SH2D6Q7Z4S9 175 aa16.54■□□□□ 0.24
SIX4-203ENST00000556952 C20orf203Q8NBC4 194 aa16.54■□□□□ 0.24
SIX4-203ENST00000556952 ICOSQ9Y6W8 199 aa16.54■□□□□ 0.24
SIX4-203ENST00000556952 MUC7Q8TAX7 377 aa16.53■□□□□ 0.24
SIX4-203ENST00000556952 CHCHD7Q9BUK0 85 aa16.53■□□□□ 0.24
SIX4-203ENST00000556952 ATP5LO75964 103 aa16.51■□□□□ 0.23
SIX4-203ENST00000556952 LINC00173Q6ZV60 143 aa16.51■□□□□ 0.23
SIX4-203ENST00000556952 NTM-AS1Q6ZSK4 140 aa16.51■□□□□ 0.23
SIX4-203ENST00000556952 MAP1LC3CQ9BXW4 147 aa16.51■□□□□ 0.23
SIX4-203ENST00000556952 IFI27L1Q96BM0 104 aa16.5■□□□□ 0.23
SIX4-203ENST00000556952 SCGB3A1Q96QR1 104 aa16.5■□□□□ 0.23
SIX4-203ENST00000556952 TRBV25-1A0A075B6N4 114 aa16.49■□□□□ 0.23
SIX4-203ENST00000556952 C3orf79P0CE67 100 aa16.49■□□□□ 0.23
SIX4-203ENST00000556952 KRTDAPP60985 99 aa16.49■□□□□ 0.23
SIX4-203ENST00000556952 RPL39P62891 51 aaKnown RBP16.49■□□□□ 0.23
SIX4-203ENST00000556952 ERASQ7Z444 233 aa16.49■□□□□ 0.23
SIX4-203ENST00000556952 A0A096LPF7 62 aa16.48■□□□□ 0.23
SIX4-203ENST00000556952 TRBV6-8A0A0A6YYG3 113 aa16.48■□□□□ 0.23
SIX4-203ENST00000556952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.47■□□□□ 0.23
SIX4-203ENST00000556952 ZFAND6Q6FIF0 208 aa16.47■□□□□ 0.23
SIX4-203ENST00000556952 TIMM17AQ99595 171 aa16.47■□□□□ 0.23
SIX4-203ENST00000556952 DYNC2H1Q8NCM8 4307 aaKnown RBP16.47■□□□□ 0.23
SIX4-203ENST00000556952 TMEM243Q9BU79 118 aa16.47■□□□□ 0.23
SIX4-203ENST00000556952 IGIPA6NJ69 53 aa16.46■□□□□ 0.23
SIX4-203ENST00000556952 TMEM141Q96I45 108 aa16.46■□□□□ 0.23
SIX4-203ENST00000556952 TENM2Q9NT68 2774 aa16.45■□□□□ 0.22
SIX4-203ENST00000556952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.45■□□□□ 0.22
SIX4-203ENST00000556952 IGKV2-29A2NJV5 120 aaPredicted RBP16.45■□□□□ 0.22
SIX4-203ENST00000556952 C3orf84H3BNL1 204 aa16.45■□□□□ 0.22
SIX4-203ENST00000556952 SYS1-DBNDD2H3BUS1 97 aa16.45■□□□□ 0.22
SIX4-203ENST00000556952 H7C423 109 aa16.45■□□□□ 0.22
SIX4-203ENST00000556952 PYGO1Q9Y3Y4 419 aa16.45■□□□□ 0.22
SIX4-203ENST00000556952 SMAGPQ0VAQ4 97 aa16.44■□□□□ 0.22
SIX4-203ENST00000556952 JOSD1Q15040 202 aaPredicted RBP16.44■□□□□ 0.22
SIX4-203ENST00000556952 SPATA12Q7Z6I5 190 aa16.44■□□□□ 0.22
SIX4-203ENST00000556952 SPANXA1Q9NS26 97 aa16.44■□□□□ 0.22
SIX4-203ENST00000556952 NPSP0C0P6 89 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 PET117Q6UWS5 81 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 Q6ZN92 141 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 UBE2D4Q9Y2X8 147 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 PLECQ15149 4684 aaKnown RBP16.43■□□□□ 0.22
SIX4-203ENST00000556952 UBE2L6O14933 153 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 CASC10Q5T4H9 136 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 C15orf53Q8NAA6 179 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 TIMM21Q9BVV7 248 aa16.43■□□□□ 0.22
SIX4-203ENST00000556952 SMIM6P0DI80 62 aa16.41■□□□□ 0.22
SIX4-203ENST00000556952 TIRAPP58753 221 aa16.41■□□□□ 0.22
SIX4-203ENST00000556952 PYY3Q5JQD4 70 aa16.41■□□□□ 0.22
SIX4-203ENST00000556952 MRPL52Q86TS9 123 aaKnown RBP16.41■□□□□ 0.22
SIX4-203ENST00000556952 PRSS1P07477 247 aa16.4■□□□□ 0.22
SIX4-203ENST00000556952 C20orf202A1L168 122 aa16.39■□□□□ 0.21
SIX4-203ENST00000556952 H0Y8G0 127 aa16.39■□□□□ 0.21
SIX4-203ENST00000556952 PAPPA-AS1Q5QFB9 102 aa16.39■□□□□ 0.21
SIX4-203ENST00000556952 BAALCQ8WXS3 180 aa16.39■□□□□ 0.21
SIX4-203ENST00000556952 CSDC2Q9Y534 153 aaKnown RBP16.39■□□□□ 0.21
SIX4-203ENST00000556952 KMT2CQ8NEZ4 4911 aaKnown RBP16.39■□□□□ 0.21
SIX4-203ENST00000556952 SCGB1D1O95968 90 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 FGF6P10767 208 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 CHCHD5Q9BSY4 110 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 TRAV12-1A0A0B4J245 112 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 LELP1Q5T871 98 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 Q8N976 141 aa16.38■□□□□ 0.21
SIX4-203ENST00000556952 IGLV4-3A0A075B6K6 122 aa16.37■□□□□ 0.21
SIX4-203ENST00000556952 ZNF25P17030 456 aaPredicted RBP16.37■□□□□ 0.21
SIX4-203ENST00000556952 LINC01545Q5VT33 79 aa16.37■□□□□ 0.21
SIX4-203ENST00000556952 LGALS9CQ6DKI2 356 aa16.37■□□□□ 0.21
SIX4-203ENST00000556952 LYPD5Q6UWN5 251 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms