RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 GAGE1Q13065 139 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 GAGE4Q13068 117 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 GAGE5Q13069 117 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 SLC25A29Q8N8R3 303 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 NEXN-AS1Q8NBZ9 246 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 PHLDA1Q8WV24 401 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-244ENST00000556898 URB1-AS1Q96HZ7 61 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 PRELID3AQ96N28 172 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 C18orf15Q96N68 181 aa3.69□□□□□ -1.82
ATXN3-244ENST00000556898 ALKBH7Q9BT30 221 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-244ENST00000556898 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 RYR1P21817 5038 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 TRAV26-1A0A087WT03 109 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 DEFB131BA0A096LNP1 70 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 K7EQD1 137 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 RHODO00212 210 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 NUPR1O60356 82 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 TNFRSF6BO95407 300 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 MT-ND6P03923 174 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 COX19Q49B96 90 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 OR10J3Q5JRS4 329 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 ZFP2Q6ZN57 461 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 ORMDL3Q8N138 153 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 ZNRF2Q8NHG8 242 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 MRAP2Q96G30 205 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-244ENST00000556898 TCAPO15273 167 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BKO60814 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BJP06899 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 LINC00694P0DN24 101 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 IFI27P40305 119 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-244ENST00000556898 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 NIT2Q9NQR4 276 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 NACAE9PAV3 2078 aa3.67□□□□□ -1.82
ATXN3-244ENST00000556898 IGLV2-18A0A075B6J9 118 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 TRAV10A0A0B4J240 114 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 TEX48A0A1B0GUV7 120 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 TRBV6-4A0A1B0GX49 114 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 C1orf196B1AJZ1 125 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 POLR2KP53803 58 aaKnown RBP3.66□□□□□ -1.82
ATXN3-244ENST00000556898 NDUFA6P56556 154 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 UBE2D3P61077 147 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 UBE2D2P62837 147 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 RHOHQ15669 191 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-244ENST00000556898 NIT1Q86X76 327 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 TMEM70Q9BUB7 260 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 ST20Q9HBF5 79 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 PRO0255Q9UI72 69 aa3.66□□□□□ -1.82
ATXN3-244ENST00000556898 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-244ENST00000556898 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ATXN3-244ENST00000556898 IGLL5B9A064 214 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 H7C1H1 209 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 CIDEAO60543 219 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 TSHBP01222 138 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 PPBPP02775 128 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 RAB5BP61020 215 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 PMCHL1Q16048 86 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 LGALS9CQ6DKI2 356 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
ATXN3-244ENST00000556898 NTM-AS1Q6ZSK4 140 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 Q8N8P6 123 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 DNAJC30Q96LL9 226 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 PRADC1Q9BSG0 188 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 MAP1LC3AQ9H492 121 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
ATXN3-244ENST00000556898 TRBV7-3A0A075B6L6 115 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-244ENST00000556898 TRBV10-1A0A0K0K1A3 114 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-244ENST00000556898 PRSS47A8MTI9 375 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 I3L3M4 83 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 VCYO14598 125 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 SERF1AO75920 110 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 PMCHP20382 165 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
ATXN3-244ENST00000556898 Q0VG73 95 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 ESRGQ1W209 222 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 BAGE3Q86Y29 109 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 ATP6V0E2Q8NHE4 81 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
ATXN3-244ENST00000556898 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms