RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 FHITP49789 147 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 ODF1Q14990 250 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 Q5BKY6 102 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 AKR1C8PQ5T2L2 129 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 MAP1LC3BQ9GZQ8 125 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 ALG5Q9Y673 324 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 CST9LP1Q5W188 147 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 INO80EQ8NBZ0 244 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-221ENST00000556342 STOML3Q8TAV4 291 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
SYNE2-221ENST00000556342 A0A0J9YXV3 536 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 GAGE12HA6NDE8 117 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 M0QY20 66 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 GZMBP10144 247 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 RAB5CP51148 216 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 SSTP61278 116 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 PRR3P79522 188 aaKnown RBP6.72□□□□□ -1.33
SYNE2-221ENST00000556342 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
SYNE2-221ENST00000556342 COX6A2Q02221 97 aa6.71□□□□□ -1.34
SYNE2-221ENST00000556342 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
SYNE2-221ENST00000556342 GTSF1Q8WW33 167 aa6.71□□□□□ -1.34
SYNE2-221ENST00000556342 TMEM243Q9BU79 118 aa6.71□□□□□ -1.34
SYNE2-221ENST00000556342 FXYD6-FXYD2A0A087WZ82 144 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 PAGE4O60829 102 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 NDUFS6O75380 124 aaKnown RBP6.7□□□□□ -1.34
SYNE2-221ENST00000556342 S100A9P06702 114 aaKnown RBP6.7□□□□□ -1.34
SYNE2-221ENST00000556342 MGPP08493 103 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 BAGE2Q86Y30 109 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 MED28Q9H204 178 aa6.7□□□□□ -1.34
SYNE2-221ENST00000556342 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 H7C1H1 209 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 GIPP09681 153 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-221ENST00000556342 RPS10P46783 165 aaKnown RBP6.69□□□□□ -1.34
SYNE2-221ENST00000556342 SULT1A2P50226 295 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 NKX2-5P52952 324 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-221ENST00000556342 SUMO4Q6EEV6 95 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 STPG4Q8N801 248 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 PRSS3P2Q8NHM4 247 aa6.69□□□□□ -1.34
SYNE2-221ENST00000556342 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
SYNE2-221ENST00000556342 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
SYNE2-221ENST00000556342 LYPD6BQ8NI32 183 aa6.68□□□□□ -1.34
SYNE2-221ENST00000556342 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
SYNE2-221ENST00000556342 UBE2L6O14933 153 aa6.67□□□□□ -1.34
SYNE2-221ENST00000556342 GAS8-AS1O95177 125 aa6.67□□□□□ -1.34
SYNE2-221ENST00000556342 RASL11AQ6T310 242 aa6.67□□□□□ -1.34
SYNE2-221ENST00000556342 REG3GQ6UW15 175 aa6.67□□□□□ -1.34
SYNE2-221ENST00000556342 A0A096LNI7 61 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 IGLC6P0CF74 106 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 SFT2D1Q8WV19 159 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 TPPP3Q9BW30 176 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 CYTL1Q9NRR1 136 aa6.66□□□□□ -1.34
SYNE2-221ENST00000556342 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-221ENST00000556342 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 AMTP48728 403 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 COTL1Q14019 142 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 TMUB2Q71RG4 321 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 AKAP14Q86UN6 197 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 NIT2Q9NQR4 276 aa6.65□□□□□ -1.34
SYNE2-221ENST00000556342 A0A1B0GV50 99 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 G3V3Q6 166 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
SYNE2-221ENST00000556342 CACNG7P62955 275 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 IFITM2Q01629 132 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNE2-221ENST00000556342 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 FAM213BQ8TBF2 198 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 MBD3L1Q8WWY6 194 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-221ENST00000556342 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
SYNE2-221ENST00000556342 ARPC5O15511 151 aa6.63□□□□□ -1.35
SYNE2-221ENST00000556342 TRGC1P0CF51 173 aa6.63□□□□□ -1.35
SYNE2-221ENST00000556342 RPS20P60866 119 aaKnown RBP6.63□□□□□ -1.35
SYNE2-221ENST00000556342 Q6ZRP5 223 aa6.62□□□□□ -1.35
SYNE2-221ENST00000556342 KCNRGQ8N5I3 272 aa6.62□□□□□ -1.35
SYNE2-221ENST00000556342 PKIGQ9Y2B9 76 aa6.62□□□□□ -1.35
SYNE2-221ENST00000556342 LPAP08519 4548 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 C19orf71A6NCJ1 209 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 UMAD1C9J7I0 102 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 F2Z2F3 143 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 NTF3P20783 257 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 FOXI1Q12951 378 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 CENPWQ5EE01 88 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 AMMECR1LQ6DCA0 310 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 TCTE3Q8IZS6 198 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 C11orf52Q96A22 123 aa6.61□□□□□ -1.35
SYNE2-221ENST00000556342 XKRY2A2RUG3 117 aa6.6□□□□□ -1.35
SYNE2-221ENST00000556342 BLOC1S1P78537 153 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms