RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TRGV2A0A075B6R0 118 aa10.49□□□□□ -0.73
VPS33B-205ENST00000556096 K7EQD1 137 aa10.49□□□□□ -0.73
VPS33B-205ENST00000556096 PRB2P02812 416 aaPredicted RBP10.49□□□□□ -0.73
VPS33B-205ENST00000556096 COX8AP10176 69 aa10.49□□□□□ -0.73
VPS33B-205ENST00000556096 HNRNPA3P51991 378 aaKnown RBP10.49□□□□□ -0.73
VPS33B-205ENST00000556096 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
VPS33B-205ENST00000556096 STPG4Q8N801 248 aa10.49□□□□□ -0.73
VPS33B-205ENST00000556096 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
VPS33B-205ENST00000556096 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
VPS33B-205ENST00000556096 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
VPS33B-205ENST00000556096 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
VPS33B-205ENST00000556096 TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 M0R143 59 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 CTAG1AP78358 180 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 PMVKQ15126 192 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-205ENST00000556096 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
VPS33B-205ENST00000556096 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 SLC25A29Q8N8R3 303 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
VPS33B-205ENST00000556096 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
VPS33B-205ENST00000556096 DNAH3Q8TD57 4116 aa10.46□□□□□ -0.73
VPS33B-205ENST00000556096 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 NPSP0C0P6 89 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 COTL1Q14019 142 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 CST9LQ9H4G1 147 aa10.46□□□□□ -0.74
VPS33B-205ENST00000556096 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
VPS33B-205ENST00000556096 CHCHD7Q9BUK0 85 aa10.45□□□□□ -0.74
VPS33B-205ENST00000556096 ZMAT5Q9UDW3 170 aaKnown RBP10.45□□□□□ -0.74
VPS33B-205ENST00000556096 DLEU1O43261 78 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 EMP1P54849 157 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 PAPPA-AS1Q5QFB9 102 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
VPS33B-205ENST00000556096 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
VPS33B-205ENST00000556096 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
VPS33B-205ENST00000556096 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 FGF6P10767 208 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 CRYBA4P53673 196 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 UBE2D3P61077 147 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 UBE2D2P62837 147 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 FHL2Q14192 279 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 DEFB135Q30KP9 77 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 BOD1L2Q8IYS8 172 aa10.44□□□□□ -0.74
VPS33B-205ENST00000556096 IGHV3-38A0A0C4DH36 116 aa10.43□□□□□ -0.74
VPS33B-205ENST00000556096 LYRM9A8MSI8 78 aa10.43□□□□□ -0.74
VPS33B-205ENST00000556096 EREGO14944 169 aa10.43□□□□□ -0.74
VPS33B-205ENST00000556096 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
VPS33B-205ENST00000556096 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
VPS33B-205ENST00000556096 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
VPS33B-205ENST00000556096 A8MZ25 164 aa10.42□□□□□ -0.74
VPS33B-205ENST00000556096 RNF183Q96D59 192 aa10.42□□□□□ -0.74
VPS33B-205ENST00000556096 SPANXA1Q9NS26 97 aa10.42□□□□□ -0.74
VPS33B-205ENST00000556096 IGLV4-69A0A075B6H9 119 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 MIFP14174 115 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 NMUP48645 174 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 GAGE12JA6NER3 117 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 SIVA1O15304 175 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 GAGE1Q13065 139 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 GAGE4Q13068 117 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 GAGE5Q13069 117 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 GAGE13Q4V321 117 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
VPS33B-205ENST00000556096 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 VCX2Q9H322 139 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
VPS33B-205ENST00000556096 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
VPS33B-205ENST00000556096 FAM104AQ969W3 186 aa10.4□□□□□ -0.74
VPS33B-205ENST00000556096 AMELXQ99217 191 aa10.4□□□□□ -0.74
VPS33B-205ENST00000556096 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.74
VPS33B-205ENST00000556096 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
VPS33B-205ENST00000556096 TCTAP57738 103 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 Q8NAQ8 132 aa10.39□□□□□ -0.75
VPS33B-205ENST00000556096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-205ENST00000556096 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
VPS33B-205ENST00000556096 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-205ENST00000556096 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
VPS33B-205ENST00000556096 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-205ENST00000556096 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
VPS33B-205ENST00000556096 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
VPS33B-205ENST00000556096 E9PLD3 99 aa10.37□□□□□ -0.75
VPS33B-205ENST00000556096 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
VPS33B-205ENST00000556096 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
VPS33B-205ENST00000556096 MEGF8Q7Z7M0 2845 aa10.36□□□□□ -0.75
VPS33B-205ENST00000556096 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-205ENST00000556096 SBSPONQ8IVN8 264 aa10.36□□□□□ -0.75
VPS33B-205ENST00000556096 SMAGPQ0VAQ4 97 aa10.36□□□□□ -0.75
VPS33B-205ENST00000556096 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms