RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
SIX1-205ENST00000555955 CD28P10747 220 aa10.75□□□□□ -0.69
SIX1-205ENST00000555955 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
SIX1-205ENST00000555955 FAM222AQ5U5X8 452 aa10.74□□□□□ -0.69
SIX1-205ENST00000555955 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
SIX1-205ENST00000555955 SEC61GP60059 68 aa10.74□□□□□ -0.69
SIX1-205ENST00000555955 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
SIX1-205ENST00000555955 A0A0U1RRA0 63 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 F6UB75 175 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 M0QY20 66 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 RNASE6Q93091 150 aaKnown RBP10.73□□□□□ -0.69
SIX1-205ENST00000555955 PCNX1Q96RV3 2341 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 TIMM17BO60830 172 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 ECSCRQ19T08 205 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 Q6JHZ5 121 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 FDCSPQ8NFU4 85 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 FAM218AQ96MZ4 157 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 Q9HAA7 133 aa10.73□□□□□ -0.69
SIX1-205ENST00000555955 ADGRG4Q8IZF6 3080 aa10.72□□□□□ -0.69
SIX1-205ENST00000555955 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
SIX1-205ENST00000555955 FAM236DA0A1B0GTK5 79 aa10.72□□□□□ -0.69
SIX1-205ENST00000555955 FAM236CP0DP71 79 aa10.72□□□□□ -0.69
SIX1-205ENST00000555955 PRIMA1Q86XR5 153 aa10.72□□□□□ -0.69
SIX1-205ENST00000555955 IGHV7-81A0A0B4J1V7 117 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 LYNX1P0DP58 116 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 BSPH1Q075Z2 132 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 LINC00846Q9NV44 126 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 FAM223BA6NKX1 122 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 U3KQE9 123 aa10.71□□□□□ -0.69
SIX1-205ENST00000555955 C14orf132Q9NPU4 83 aa10.7□□□□□ -0.7
SIX1-205ENST00000555955 FAM215AQ9Y5M1 114 aa10.7□□□□□ -0.7
SIX1-205ENST00000555955 NDUFC2O95298 119 aa10.7□□□□□ -0.7
SIX1-205ENST00000555955 TMEM86BQ8N661 226 aa10.7□□□□□ -0.7
SIX1-205ENST00000555955 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
SIX1-205ENST00000555955 TMEM243Q9BU79 118 aa10.69□□□□□ -0.7
SIX1-205ENST00000555955 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
SIX1-205ENST00000555955 ZNF415Q09FC8 603 aa10.69□□□□□ -0.7
SIX1-205ENST00000555955 MED13LQ71F56 2210 aa10.68□□□□□ -0.7
SIX1-205ENST00000555955 NDUFC2-KCTD14E9PQ53 114 aa10.68□□□□□ -0.7
SIX1-205ENST00000555955 APRG1Q8IVJ8 170 aa10.68□□□□□ -0.7
SIX1-205ENST00000555955 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
SIX1-205ENST00000555955 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
SIX1-205ENST00000555955 PRORYQ9H606 182 aa10.67□□□□□ -0.7
SIX1-205ENST00000555955 CUL9Q8IWT3 2517 aa10.67□□□□□ -0.7
SIX1-205ENST00000555955 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
SIX1-205ENST00000555955 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
SIX1-205ENST00000555955 IGKV3-7A0A075B6H7 116 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 HILS1P60008 231 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 NDUFA1O15239 70 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 PTPRQQ9UMZ3 2332 aa10.66□□□□□ -0.7
SIX1-205ENST00000555955 RELNP78509 3460 aa10.65□□□□□ -0.7
SIX1-205ENST00000555955 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.7
SIX1-205ENST00000555955 AVPP01185 164 aa10.65□□□□□ -0.7
SIX1-205ENST00000555955 GHRHP01286 108 aa10.65□□□□□ -0.7
SIX1-205ENST00000555955 WFDC9Q8NEX5 89 aa10.65□□□□□ -0.7
SIX1-205ENST00000555955 G3V318 75 aa10.65□□□□□ -0.71
SIX1-205ENST00000555955 SOSTDC1Q6X4U4 206 aa10.65□□□□□ -0.71
SIX1-205ENST00000555955 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 Q8N6K4 173 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 Q9H8V8 135 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 SOCS3O14543 225 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 CDKN2A-AS1Q9UH64 79 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 V9GYY9 64 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 DMXL1Q9Y485 3027 aa10.64□□□□□ -0.71
SIX1-205ENST00000555955 Q8N9W7 124 aa10.63□□□□□ -0.71
SIX1-205ENST00000555955 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1BA6NDE4 496 aaKnown RBP10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1EA6NEQ0 496 aaKnown RBP10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1DP0C7P1 496 aaKnown RBP10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1A1P0DJD3 496 aaKnown RBP10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1CP0DJD4 496 aa10.63□□□□□ -0.71
SIX1-205ENST00000555955 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
SIX1-205ENST00000555955 GVINP1Q7Z2Y8 2422 aa10.63□□□□□ -0.71
SIX1-205ENST00000555955 SVEP1Q4LDE5 3571 aa10.63□□□□□ -0.71
SIX1-205ENST00000555955 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 IGHG2P01859 326 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 PSMB8P28062 276 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 KLLNB2CW77 178 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 HIST2H2BCQ6DN03 193 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 HIST2H2BDQ6DRA6 164 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 BRK1Q8WUW1 75 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 COPS9Q8WXC6 57 aa10.62□□□□□ -0.71
SIX1-205ENST00000555955 SPTBN2O15020 2390 aa10.61□□□□□ -0.71
SIX1-205ENST00000555955 ODF3BA8MYP8 253 aa10.61□□□□□ -0.71
SIX1-205ENST00000555955 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
SIX1-205ENST00000555955 RPL28P46779 137 aaKnown RBP10.61□□□□□ -0.71
SIX1-205ENST00000555955 UNQ9165/PRO28630Q6UXU0 137 aa10.61□□□□□ -0.71
SIX1-205ENST00000555955 XCL1P47992 114 aa10.6□□□□□ -0.71
SIX1-205ENST00000555955 XCL2Q9UBD3 114 aa10.6□□□□□ -0.71
SIX1-205ENST00000555955 SPTBN1Q01082 2364 aaKnown RBP10.6□□□□□ -0.71
SIX1-205ENST00000555955 ZFHX2Q9C0A1 2572 aaPredicted RBP10.6□□□□□ -0.71
SIX1-205ENST00000555955 EP300Q09472 2414 aaPredicted RBP10.6□□□□□ -0.71
SIX1-205ENST00000555955 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
SIX1-205ENST00000555955 E7EQL1 145 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms