RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
SRP54-208ENST00000555557 Q6ZTC4 211 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 C11orf45Q8TAV5 145 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 ST20Q9HBF5 79 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 HHLA3Q9XRX5 114 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 SDHAF1A6NFY7 115 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 F5H768 121 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 ATP5G1P05496 136 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
SRP54-208ENST00000555557 VAMP3Q15836 100 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 EDA2RQ9HAV5 297 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
SRP54-208ENST00000555557 IGLV2-18A0A075B6J9 118 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 A0A0J9YY99 117 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 TEX48A0A1B0GUV7 120 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 PPP1R17O96001 155 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 AMTP48728 403 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
SRP54-208ENST00000555557 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 TMEM70Q9BUB7 260 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 TRBV6-5A0A0K0K1A5 114 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 GAGE12JA6NER3 117 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 PRSS47A8MTI9 375 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 CRYBA4P53673 196 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 GAGE4Q13068 117 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 GAGE5Q13069 117 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 GAGE13Q4V321 117 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 OCIAD2Q56VL3 154 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 FA2HQ7L5A8 372 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 FAM19A2Q8N3H0 131 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 PHLDA1Q8WV24 401 aaPredicted RBP7.17□□□□□ -1.26
SRP54-208ENST00000555557 SMIM2Q9BVW6 85 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
SRP54-208ENST00000555557 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
SRP54-208ENST00000555557 Q8N8P6 123 aa7.16□□□□□ -1.26
SRP54-208ENST00000555557 PRO0255Q9UI72 69 aa7.16□□□□□ -1.26
SRP54-208ENST00000555557 TRBV7-3A0A075B6L6 115 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 TRAV26-1A0A087WT03 109 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 K7ERU9 68 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 PAX4O43316 350 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 RHOHQ15669 191 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 VSIG2Q96IQ7 327 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.26
SRP54-208ENST00000555557 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
SRP54-208ENST00000555557 TRAV9-2A0A087WT02 112 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 TRBV10-1A0A0K0K1A3 114 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 TRBV27A0A0K0K1C4 114 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 TMEM238C9JI98 176 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 VCYO14598 125 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 HSBP1O75506 76 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 C3orf79P0CE67 100 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 NHLRC4P0CG21 123 aaPredicted RBP7.15□□□□□ -1.27
SRP54-208ENST00000555557 GYPEP15421 78 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 PMCHP20382 165 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.27
SRP54-208ENST00000555557 PET117Q6UWS5 81 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.27
SRP54-208ENST00000555557 DNAJC30Q96LL9 226 aa7.15□□□□□ -1.27
SRP54-208ENST00000555557 A0A096LPF7 62 aa7.14□□□□□ -1.27
SRP54-208ENST00000555557 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
SRP54-208ENST00000555557 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 I3L3M4 83 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 UBE2D3P61077 147 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 UBE2D2P62837 147 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 Q6ZVH6 145 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 DEFB131BA0A096LNP1 70 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 TSHBP01222 138 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 RPL32P62910 135 aaKnown RBP7.13□□□□□ -1.27
SRP54-208ENST00000555557 LAGE3Q14657 143 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
SRP54-208ENST00000555557 A0A096LNJ9 63 aa7.12□□□□□ -1.27
SRP54-208ENST00000555557 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
SRP54-208ENST00000555557 FCER1GP30273 86 aa7.12□□□□□ -1.27
SRP54-208ENST00000555557 STAB2Q8WWQ8 2551 aa7.12□□□□□ -1.27
SRP54-208ENST00000555557 NUDT3O95989 172 aa7.11□□□□□ -1.27
SRP54-208ENST00000555557 LINC00694P0DN24 101 aa7.11□□□□□ -1.27
SRP54-208ENST00000555557 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
SRP54-208ENST00000555557 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
SRP54-208ENST00000555557 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 ORMDL2Q53FV1 153 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 NTM-AS1Q6ZSK4 140 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 ATP6V0E2Q8NHE4 81 aa7.1□□□□□ -1.27
SRP54-208ENST00000555557 TRAV10A0A0B4J240 114 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 HBDP02042 147 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
SRP54-208ENST00000555557 C2orf66Q6UXQ4 117 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 CHCHD7Q9BUK0 85 aa7.09□□□□□ -1.27
SRP54-208ENST00000555557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
SRP54-208ENST00000555557 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
SRP54-208ENST00000555557 K7EMI3 77 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms