RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 IGLV1-51P01701 117 aa17.56■□□□□ 0.4
TMEM260-207ENST00000555497 ZNRF2Q8NHG8 242 aa17.55■□□□□ 0.4
TMEM260-207ENST00000555497 MYMXA0A1B0GTQ4 84 aa17.55■□□□□ 0.4
TMEM260-207ENST00000555497 RS1O15537 224 aa17.54■□□□□ 0.4
TMEM260-207ENST00000555497 GIG44P09565 113 aaPredicted RBP17.54■□□□□ 0.4
TMEM260-207ENST00000555497 C19orf73Q9NVV2 129 aa17.54■□□□□ 0.4
TMEM260-207ENST00000555497 TNFRSF18Q9Y5U5 241 aa17.54■□□□□ 0.4
TMEM260-207ENST00000555497 IL17DQ8TAD2 202 aa17.53■□□□□ 0.4
TMEM260-207ENST00000555497 NOTCH3Q9UM47 2321 aa17.53■□□□□ 0.4
TMEM260-207ENST00000555497 NAA38Q9BRA0 125 aaKnown RBP17.53■□□□□ 0.4
TMEM260-207ENST00000555497 OTOGQ6ZRI0 2925 aa17.53■□□□□ 0.4
TMEM260-207ENST00000555497 CEND1Q8N111 149 aa17.52■□□□□ 0.4
TMEM260-207ENST00000555497 RAB37Q96AX2 223 aa17.52■□□□□ 0.4
TMEM260-207ENST00000555497 IGHV3-53P01767 116 aa17.52■□□□□ 0.39
TMEM260-207ENST00000555497 PAPPA-AS1Q5QFB9 102 aa17.51■□□□□ 0.39
TMEM260-207ENST00000555497 FAM104AQ969W3 186 aa17.51■□□□□ 0.39
TMEM260-207ENST00000555497 TM2D2Q9BX73 214 aa17.51■□□□□ 0.39
TMEM260-207ENST00000555497 RHODO00212 210 aa17.51■□□□□ 0.39
TMEM260-207ENST00000555497 IGLV4-3A0A075B6K6 122 aa17.5■□□□□ 0.39
TMEM260-207ENST00000555497 G3V4G9 280 aa17.5■□□□□ 0.39
TMEM260-207ENST00000555497 A0A1W2PPM0 123 aa17.49■□□□□ 0.39
TMEM260-207ENST00000555497 OR5A1Q8NGJ0 315 aa17.49■□□□□ 0.39
TMEM260-207ENST00000555497 TRGV1A0A0A0MS02 117 aa17.48■□□□□ 0.39
TMEM260-207ENST00000555497 RPL35AP18077 110 aaKnown RBP17.48■□□□□ 0.39
TMEM260-207ENST00000555497 TMEM170BQ5T4T1 132 aa17.48■□□□□ 0.39
TMEM260-207ENST00000555497 CEMP1Q6PRD7 247 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-207ENST00000555497 TRBV7-3A0A075B6L6 115 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 ZNF815PA8K554 130 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 K7ERJ3 54 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 CMC4P56277 68 aaPredicted RBP17.47■□□□□ 0.39
TMEM260-207ENST00000555497 PLEKHB2Q96CS7 222 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 CHCHD7Q9BUK0 85 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 IGHV3-38A0A0C4DH36 116 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 NFE4Q86UQ8 179 aa17.47■□□□□ 0.39
TMEM260-207ENST00000555497 TSPEAR-AS2P59090 65 aa17.46■□□□□ 0.39
TMEM260-207ENST00000555497 TAL2Q16559 108 aa17.46■□□□□ 0.39
TMEM260-207ENST00000555497 HIST1H4GQ99525 98 aa17.46■□□□□ 0.39
TMEM260-207ENST00000555497 SPCS1Q9Y6A9 102 aa17.46■□□□□ 0.39
TMEM260-207ENST00000555497 SMIM13P0DJ93 91 aa17.45■□□□□ 0.38
TMEM260-207ENST00000555497 Q6ZTI0 123 aa17.45■□□□□ 0.38
TMEM260-207ENST00000555497 PHLDA1Q8WV24 401 aaPredicted RBP17.45■□□□□ 0.38
TMEM260-207ENST00000555497 FAM110AQ9BQ89 295 aa17.45■□□□□ 0.38
TMEM260-207ENST00000555497 ZNF479Q96JC4 524 aa17.45■□□□□ 0.38
TMEM260-207ENST00000555497 PYGO1Q9Y3Y4 419 aa17.45■□□□□ 0.38
TMEM260-207ENST00000555497 TMEM263Q8WUH6 116 aaKnown RBP17.44■□□□□ 0.38
TMEM260-207ENST00000555497 VCX2Q9H322 139 aa17.44■□□□□ 0.38
TMEM260-207ENST00000555497 NHP2Q9NX24 153 aaKnown RBP17.44■□□□□ 0.38
TMEM260-207ENST00000555497 INAFM1C9JVW0 142 aa17.44■□□□□ 0.38
TMEM260-207ENST00000555497 HERVK_113P61574 105 aa17.44■□□□□ 0.38
TMEM260-207ENST00000555497 DNAJC30Q96LL9 226 aa17.44■□□□□ 0.38
TMEM260-207ENST00000555497 A0A0J9YXV3 536 aa17.43■□□□□ 0.38
TMEM260-207ENST00000555497 FABP2P12104 132 aa17.43■□□□□ 0.38
TMEM260-207ENST00000555497 NDUFA11Q86Y39 141 aa17.43■□□□□ 0.38
TMEM260-207ENST00000555497 FN1P02751 2386 aaKnown RBP17.41■□□□□ 0.38
TMEM260-207ENST00000555497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.41■□□□□ 0.38
TMEM260-207ENST00000555497 IGKV2-29A2NJV5 120 aaPredicted RBP17.41■□□□□ 0.38
TMEM260-207ENST00000555497 RNASE13Q5GAN3 156 aaKnown RBP17.41■□□□□ 0.38
TMEM260-207ENST00000555497 SAMD5Q5TGI4 173 aa17.41■□□□□ 0.38
TMEM260-207ENST00000555497 AMELXQ99217 191 aa17.41■□□□□ 0.38
TMEM260-207ENST00000555497 PLAC8L1A1L4L8 177 aa17.41■□□□□ 0.38
TMEM260-207ENST00000555497 CSNK1G2-AS1Q8NCQ2 148 aa17.41■□□□□ 0.38
TMEM260-207ENST00000555497 NOP10Q9NPE3 64 aaKnown RBP17.41■□□□□ 0.38
TMEM260-207ENST00000555497 C2CD3Q4AC94 2353 aa17.41■□□□□ 0.38
TMEM260-207ENST00000555497 ZNF22P17026 224 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-207ENST00000555497 LINC00482Q8N8I6 264 aa17.4■□□□□ 0.38
TMEM260-207ENST00000555497 UBE2D4Q9Y2X8 147 aa17.4■□□□□ 0.38
TMEM260-207ENST00000555497 TMEM223A0PJW6 202 aa17.39■□□□□ 0.37
TMEM260-207ENST00000555497 SCGB1D4Q6XE38 83 aa17.39■□□□□ 0.37
TMEM260-207ENST00000555497 NSD1Q96L73 2696 aaPredicted RBP17.38■□□□□ 0.37
TMEM260-207ENST00000555497 PF4P02776 101 aa17.37■□□□□ 0.37
TMEM260-207ENST00000555497 TMEM238C9JI98 176 aa17.37■□□□□ 0.37
TMEM260-207ENST00000555497 C12orf74Q32Q52 190 aa17.37■□□□□ 0.37
TMEM260-207ENST00000555497 SPATA3Q8NHX4 192 aa17.37■□□□□ 0.37
TMEM260-207ENST00000555497 J3QQQ9 107 aa17.36■□□□□ 0.37
TMEM260-207ENST00000555497 DAZ2Q13117 558 aaKnown RBP17.36■□□□□ 0.37
TMEM260-207ENST00000555497 A0A0J9YY99 117 aa17.36■□□□□ 0.37
TMEM260-207ENST00000555497 TRAV4A0A0B4J268 109 aa17.35■□□□□ 0.37
TMEM260-207ENST00000555497 SPANXA1Q9NS26 97 aa17.35■□□□□ 0.37
TMEM260-207ENST00000555497 IGHV3-64A0A075B6Q5 118 aa17.35■□□□□ 0.37
TMEM260-207ENST00000555497 CRYBA4P53673 196 aa17.34■□□□□ 0.37
TMEM260-207ENST00000555497 Q6ZUT4 128 aa17.34■□□□□ 0.37
TMEM260-207ENST00000555497 C16orf74Q96GX8 76 aa17.34■□□□□ 0.37
TMEM260-207ENST00000555497 VWFP04275 2813 aa17.34■□□□□ 0.37
TMEM260-207ENST00000555497 MRPS36P82909 103 aaKnown RBP17.33■□□□□ 0.37
TMEM260-207ENST00000555497 K7EQD1 137 aa17.33■□□□□ 0.36
TMEM260-207ENST00000555497 LEPROTO15243 131 aa17.33■□□□□ 0.36
TMEM260-207ENST00000555497 SLC25A29Q8N8R3 303 aa17.33■□□□□ 0.36
TMEM260-207ENST00000555497 C1QTNF4Q9BXJ3 329 aa17.33■□□□□ 0.36
TMEM260-207ENST00000555497 HIVEP1P15822 2718 aa17.32■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE7O76087 117 aa17.32■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE12FP0CL80 117 aa17.32■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE12GP0CL81 117 aa17.32■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE12IP0CL82 117 aa17.32■□□□□ 0.36
TMEM260-207ENST00000555497 A0A1B0GWB2 263 aa17.31■□□□□ 0.36
TMEM260-207ENST00000555497 LGALS3P17931 250 aaKnown RBP17.31■□□□□ 0.36
TMEM260-207ENST00000555497 IGLL5B9A064 214 aa17.31■□□□□ 0.36
TMEM260-207ENST00000555497 SRSF9Q13242 221 aaKnown RBP eCLIP17.31■□□□□ 0.36
TMEM260-207ENST00000555497 RRN3P1Q2M238 152 aa17.3■□□□□ 0.36
TMEM260-207ENST00000555497 NTM-AS1Q6ZSK4 140 aa17.29■□□□□ 0.36
TMEM260-207ENST00000555497 TRBV10-1A0A0K0K1A3 114 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms