RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 AZU1P20160 251 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 HSD52Q0P140 79 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
RIPK3-204ENST00000554756 CBY3A6NI87 242 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 RHOHQ15669 191 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 CELA1Q9UNI1 258 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 C3orf84H3BNL1 204 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 CRYGDP07320 174 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 ZNF415Q09FC8 603 aa8.66□□□□□ -1.02
RIPK3-204ENST00000554756 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
RIPK3-204ENST00000554756 MUC4Q99102 2169 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 A8MWV9 139 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 F5H697 171 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 M0QY20 66 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 NMUP48645 174 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 ZNF876PQ49A33 203 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 TIMM17AQ99595 171 aa8.65□□□□□ -1.02
RIPK3-204ENST00000554756 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
RIPK3-204ENST00000554756 ZNF56Q15929 161 aa8.64□□□□□ -1.03
RIPK3-204ENST00000554756 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
RIPK3-204ENST00000554756 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
RIPK3-204ENST00000554756 SPXQ9BT56 116 aa8.64□□□□□ -1.03
RIPK3-204ENST00000554756 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
RIPK3-204ENST00000554756 A0A087WWL8 130 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 A6NDN8 102 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 M0R2P5 195 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 CASC10Q5T4H9 136 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 RHODO00212 210 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 FAM74A4Q5TZK3 123 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 JPT2Q9H910 190 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
RIPK3-204ENST00000554756 RNASE8Q8TDE3 154 aaKnown RBP8.62□□□□□ -1.03
RIPK3-204ENST00000554756 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
RIPK3-204ENST00000554756 IGIPA6NJ69 53 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 NPSP0C0P6 89 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 TAL2Q16559 108 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 Q6ZTC4 211 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 TMEM263Q8WUH6 116 aaKnown RBP8.61□□□□□ -1.03
RIPK3-204ENST00000554756 KMT2CQ8NEZ4 4911 aaKnown RBP8.61□□□□□ -1.03
RIPK3-204ENST00000554756 I3L3M4 83 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 PMVKQ15126 192 aa8.61□□□□□ -1.03
RIPK3-204ENST00000554756 CEMP1Q6PRD7 247 aaPredicted RBP8.61□□□□□ -1.03
RIPK3-204ENST00000554756 NOP10Q9NPE3 64 aaKnown RBP8.61□□□□□ -1.03
RIPK3-204ENST00000554756 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
RIPK3-204ENST00000554756 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
RIPK3-204ENST00000554756 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
RIPK3-204ENST00000554756 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 HERVK_113P61574 105 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 DAD1P61803 113 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 UBE2V1Q13404 147 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
RIPK3-204ENST00000554756 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 E9PLD3 99 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 H3BRM9 83 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 HTN3P15516 51 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 CRYBA4P53673 196 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 C11orf72Q8NBR9 251 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 TRBV25-1A0A075B6N4 114 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
RIPK3-204ENST00000554756 DEFB131BA0A096LNP1 70 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 GAGE7O76087 117 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 TSHBP01222 138 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
RIPK3-204ENST00000554756 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
RIPK3-204ENST00000554756 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 IGLL5B9A064 214 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 RS1O15537 224 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
RIPK3-204ENST00000554756 PTTG1IPP53801 180 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms