RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 WDR61Q9GZS3 305 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 MANBALQ9NQG1 85 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 CTXND1A0A1B0GTU2 59 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 FNDC10F2Z333 226 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 LECT2O14960 151 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 IGHV3-30P01768 117 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 GPX1P07203 203 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 IGHV3-30-5P0DP03 117 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 FGF7P21781 194 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 HNRNPA3P51991 378 aaKnown RBP3.13□□□□□ -1.91
ATXN3-228ENST00000554592 OR10J3Q5JRS4 329 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 ERASQ7Z444 233 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 LINC00305Q7Z4B0 112 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 ZFP82Q8N141 532 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 BAALCQ8WXS3 180 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 FAM19A4Q96LR4 140 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 PFDN5Q99471 154 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 AGPAT4-IT1Q9H0P7 198 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 SH3BGRL3Q9H299 93 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 NPVFQ9HCQ7 196 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 NAT8Q9UHE5 227 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 TP53TG3Q9ULZ0 132 aa3.13□□□□□ -1.91
ATXN3-228ENST00000554592 FBLL1A6NHQ2 334 aaKnown RBP3.12□□□□□ -1.91
ATXN3-228ENST00000554592 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 H3BTX0 84 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 SLC17A3O00476 420 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 PDE6DO43924 150 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 GCGP01275 180 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 TYMSP04818 313 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 IGLC2P0DOY2 106 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 GATA1P15976 413 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-228ENST00000554592 CRISP2P16562 243 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 RAB4BP61018 213 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 PKIAP61925 76 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 CCL20P78556 96 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 RPL19P84098 196 aaKnown RBP3.12□□□□□ -1.91
ATXN3-228ENST00000554592 ERCC8Q13216 396 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 RAB31Q13636 194 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 TMEM241Q24JQ0 296 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 LELP1Q5T871 98 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 KCNIP4Q6PIL6 250 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-228ENST00000554592 CYB561D1Q8N8Q1 229 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 OR4C5Q8NGB2 326 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 ATP6V0E2Q8NHE4 81 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 ISOC2Q96AB3 205 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 NPCDR1Q9BY65 106 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-228ENST00000554592 SLC39A9Q9NUM3 307 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
ATXN3-228ENST00000554592 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 TRAV8-1A0A0A6YYK1 113 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 TRAV4A0A0B4J268 109 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 LOC100131303A0A0U1RQF7 123 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 F6UZH7 168 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 ZNF253O75346 499 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 CDC34P49427 236 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-228ENST00000554592 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 MEF2BQ02080 365 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-228ENST00000554592 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-228ENST00000554592 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 DPH3P1Q9H4G8 78 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
ATXN3-228ENST00000554592 TRBV7-9A0A0J9YWB2 115 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 A0A1W2PPV4 95 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 GGTLC3B5MD39 225 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 M0R3E3 92 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 COX7A2P2O60397 106 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 CXCL1P09341 107 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
ATXN3-228ENST00000554592 HIST1H1EP10412 219 aaKnown RBP3.1□□□□□ -1.91
ATXN3-228ENST00000554592 AKR1C3P42330 323 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms