RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MARVELD1Q9BSK0 173 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 MLST8Q9BVC4 326 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 F5H697 171 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 AMTP48728 403 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 SULT1A2P50226 295 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 UBE2G2P60604 165 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 SERF2P84101 59 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 AP1S3Q96PC3 154 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 PKIGQ9Y2B9 76 aa5.41□□□□□ -1.54
PRKCH-208ENST00000553846 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-208ENST00000553846 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
PRKCH-208ENST00000553846 FER1L6-AS1Q8NA97 138 aa5.4□□□□□ -1.54
PRKCH-208ENST00000553846 NKX6-2Q9C056 277 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-208ENST00000553846 ACTR3CQ9C0K3 210 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-208ENST00000553846 MRPL18Q9H0U6 180 aaKnown RBP5.4□□□□□ -1.54
PRKCH-208ENST00000553846 TNFSF18Q9UNG2 199 aa5.4□□□□□ -1.54
PRKCH-208ENST00000553846 MBP02144 154 aa5.39□□□□□ -1.55
PRKCH-208ENST00000553846 MT-ND6P03923 174 aa5.39□□□□□ -1.55
PRKCH-208ENST00000553846 C9orf116Q5BN46 136 aaPredicted RBP5.39□□□□□ -1.55
PRKCH-208ENST00000553846 SPANXN1Q5VSR9 72 aa5.39□□□□□ -1.55
PRKCH-208ENST00000553846 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
PRKCH-208ENST00000553846 ALG5Q9Y673 324 aa5.39□□□□□ -1.55
PRKCH-208ENST00000553846 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 IGKV3OR2-268A0A0C4DH90 116 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 CTXND1A0A1B0GTU2 59 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-208ENST00000553846 EIF4EBP3O60516 100 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-208ENST00000553846 IGLC6P0CF74 106 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 MEF2BQ02080 365 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-208ENST00000553846 SYCNQ0VAF6 134 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 RASL11AQ6T310 242 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 ANAPC16Q96DE5 110 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 TCEAL7Q9BRU2 100 aa5.38□□□□□ -1.55
PRKCH-208ENST00000553846 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
PRKCH-208ENST00000553846 BCL2P10415 239 aa5.37□□□□□ -1.55
PRKCH-208ENST00000553846 FHITP49789 147 aa5.37□□□□□ -1.55
PRKCH-208ENST00000553846 UBE2G1P62253 170 aa5.37□□□□□ -1.55
PRKCH-208ENST00000553846 RPL7L1Q6DKI1 246 aaKnown RBP5.37□□□□□ -1.55
PRKCH-208ENST00000553846 FXYD6-FXYD2A0A087WZ82 144 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 UBE2L6O14933 153 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 MGPP08493 103 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 NTF3P20783 257 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 XCL1P47992 114 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 CAMPP49913 170 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 COTL1Q14019 142 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 Q6ZNX1 250 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 NUP35Q8NFH5 326 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 NIT2Q9NQR4 276 aa5.36□□□□□ -1.55
PRKCH-208ENST00000553846 BORCS7-ASMTA0A0B4J1R7 106 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 CCL25O15444 150 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 APOMO95445 188 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 FGF6P10767 208 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
PRKCH-208ENST00000553846 SSTP61278 116 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 Q5BKY6 102 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 AKR1C8PQ5T2L2 129 aa5.35□□□□□ -1.55
PRKCH-208ENST00000553846 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
PRKCH-208ENST00000553846 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.55
PRKCH-208ENST00000553846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
PRKCH-208ENST00000553846 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
PRKCH-208ENST00000553846 H7C423 109 aa5.34□□□□□ -1.55
PRKCH-208ENST00000553846 AKR1C3P42330 323 aa5.34□□□□□ -1.55
PRKCH-208ENST00000553846 CST9LP1Q5W188 147 aa5.34□□□□□ -1.55
PRKCH-208ENST00000553846 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
PRKCH-208ENST00000553846 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
PRKCH-208ENST00000553846 MAP1LC3B2A6NCE7 125 aa5.33□□□□□ -1.56
PRKCH-208ENST00000553846 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
PRKCH-208ENST00000553846 MAP1LC3BQ9GZQ8 125 aa5.33□□□□□ -1.56
PRKCH-208ENST00000553846 TRAV1-1A0A0B4J248 108 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 A0A1B0GV50 99 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 SCO2A0A1W2PP80 73 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 NCR2O95944 276 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 GIPP09681 153 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-208ENST00000553846 ZNF25P17030 456 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-208ENST00000553846 GATD1Q8NB37 220 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 STOML3Q8TAV4 291 aa5.32□□□□□ -1.56
PRKCH-208ENST00000553846 A0A087X002 238 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 ZNF561-AS1K7EIQ3 104 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 S100A9P06702 114 aaKnown RBP5.31□□□□□ -1.56
PRKCH-208ENST00000553846 ESDP10768 282 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 UBE2D1P51668 147 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 AMMECR1LQ6DCA0 310 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 BAGE2Q86Y30 109 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 CNFNQ9BYD5 112 aa5.31□□□□□ -1.56
PRKCH-208ENST00000553846 A0A087WZ39 114 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 ARPC5O15511 151 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 BCL2L11O43521 198 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 PAGE4O60829 102 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 TSPAN13O95857 204 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 CTRLP40313 264 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms