RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RHOHQ15669 191 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 TMEM263Q8WUH6 116 aaKnown RBP11.36□□□□□ -0.59
ACTN1-209ENST00000553659 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 JPT2Q9H910 190 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 X6R8D5 127 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 TRAV12-1A0A0B4J245 112 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 PRSS1P07477 247 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 Q6ZN92 141 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 Q6ZTC4 211 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 C1orf158Q8N1D5 194 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 CYSLTR1Q9Y271 337 aa11.35□□□□□ -0.59
ACTN1-209ENST00000553659 M0R143 59 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 RS1O15537 224 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 CIDEAO60543 219 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 CSNK1G2-AS1Q8NCQ2 148 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
ACTN1-209ENST00000553659 DNAH6Q9C0G6 4158 aa11.33□□□□□ -0.6
ACTN1-209ENST00000553659 HNRNPA3P51991 378 aaKnown RBP11.33□□□□□ -0.6
ACTN1-209ENST00000553659 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
ACTN1-209ENST00000553659 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
ACTN1-209ENST00000553659 KIAA1109Q2LD37 5005 aa11.33□□□□□ -0.6
ACTN1-209ENST00000553659 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 I3L3M4 83 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 CTAG1AP78358 180 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 UFSP1Q6NVU6 142 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
ACTN1-209ENST00000553659 TMEM141Q96I45 108 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
ACTN1-209ENST00000553659 MUC4Q99102 2169 aa11.32□□□□□ -0.6
ACTN1-209ENST00000553659 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 A0A087WX48 190 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 DPM2O94777 84 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 PLNP26678 52 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
ACTN1-209ENST00000553659 ODF1Q14990 250 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 C12orf74Q32Q52 190 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 CFAP126Q5VTH2 177 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 ERASQ7Z444 233 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
ACTN1-209ENST00000553659 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
ACTN1-209ENST00000553659 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
ACTN1-209ENST00000553659 IGKCP01834 107 aa11.3□□□□□ -0.6
ACTN1-209ENST00000553659 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
ACTN1-209ENST00000553659 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
ACTN1-209ENST00000553659 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 P0DMU3 169 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 C2orf88Q9BSF0 95 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
ACTN1-209ENST00000553659 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 COX8AP10176 69 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 AZU1P20160 251 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
ACTN1-209ENST00000553659 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
ACTN1-209ENST00000553659 F8VRH5 84 aa11.27□□□□□ -0.61
ACTN1-209ENST00000553659 NPSP0C0P6 89 aa11.27□□□□□ -0.61
ACTN1-209ENST00000553659 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.61
ACTN1-209ENST00000553659 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
ACTN1-209ENST00000553659 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
ACTN1-209ENST00000553659 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
ACTN1-209ENST00000553659 PRSS29PA6NIE9 313 aa11.26□□□□□ -0.61
ACTN1-209ENST00000553659 DLEU1O43261 78 aa11.26□□□□□ -0.61
ACTN1-209ENST00000553659 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
ACTN1-209ENST00000553659 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
ACTN1-209ENST00000553659 M0R2N4 97 aa11.25□□□□□ -0.61
ACTN1-209ENST00000553659 RTL8CO15255 209 aa11.25□□□□□ -0.61
ACTN1-209ENST00000553659 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
ACTN1-209ENST00000553659 SIVA1O15304 175 aa11.24□□□□□ -0.61
ACTN1-209ENST00000553659 TSHBP01222 138 aa11.24□□□□□ -0.61
ACTN1-209ENST00000553659 NEGR1Q7Z3B1 354 aa11.24□□□□□ -0.61
ACTN1-209ENST00000553659 BAALCQ8WXS3 180 aa11.24□□□□□ -0.61
ACTN1-209ENST00000553659 SNHG12Q9BXW3 62 aa11.24□□□□□ -0.61
ACTN1-209ENST00000553659 IGHV3-73A0A0B4J1V6 119 aa11.23□□□□□ -0.61
ACTN1-209ENST00000553659 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
ACTN1-209ENST00000553659 CRYBA4P53673 196 aa11.23□□□□□ -0.61
ACTN1-209ENST00000553659 PMVKQ15126 192 aa11.23□□□□□ -0.61
ACTN1-209ENST00000553659 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
ACTN1-209ENST00000553659 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
ACTN1-209ENST00000553659 PRM2P04554 102 aa11.22□□□□□ -0.61
ACTN1-209ENST00000553659 SPART-AS1P0CW21 52 aa11.22□□□□□ -0.61
ACTN1-209ENST00000553659 ANKRD39Q53RE8 183 aa11.22□□□□□ -0.61
ACTN1-209ENST00000553659 PYGO1Q9Y3Y4 419 aa11.22□□□□□ -0.61
ACTN1-209ENST00000553659 K7EQD1 137 aa11.21□□□□□ -0.61
ACTN1-209ENST00000553659 EREGO14944 169 aa11.21□□□□□ -0.61
ACTN1-209ENST00000553659 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
ACTN1-209ENST00000553659 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
ACTN1-209ENST00000553659 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
ACTN1-209ENST00000553659 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
ACTN1-209ENST00000553659 NOP10Q9NPE3 64 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms