RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 LRRC37A2A6NM11 1700 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 IFT172Q9UG01 1749 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 CFTRP13569 1480 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 IFT140Q96RY7 1462 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 IBTKQ9P2D0 1353 aaPredicted RBP0.25□□□□□ -2.37
USP44-207ENST00000552237 GVQW2A0A096LPI5 108 aaPredicted RBP0.25□□□□□ -2.37
USP44-207ENST00000552237 PRH1P02810 166 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 HMGN1P05114 100 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 UBE2D1P51668 147 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 NPC2P61916 151 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 SPAG11BQ08648 103 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 PIGYQ3MUY2 71 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 TMEM170BQ5T4T1 132 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 Q5VV11 94 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 SPAG11AQ6PDA7 123 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 LENEPQ9Y5L5 61 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 LINC00312Q9Y6C7 94 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 U3KQA8 63 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 POLQO75417 2590 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 NCOR1O75376 2440 aa0.25□□□□□ -2.37
USP44-207ENST00000552237 PLXNB2O15031 1838 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 ERCC6L2Q5T890 1561 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 PXDNQ92626 1479 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 PPIP5K1Q6PFW1 1433 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 PTPRQQ9UMZ3 2332 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 FXYD6-FXYD2A0A087WZ82 144 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 FAM24AA6NFZ4 105 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 MIF4GDA9UHW6 222 aaKnown RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 F6UZH7 168 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 M0R3E3 92 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 SSSCA1O60232 199 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 SIX6O95475 246 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 AKAIN1P0CW23 69 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 HIST1H1DP16402 221 aaKnown RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 FGF7P21781 194 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 ATP5EP56381 51 aaPredicted RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 HAMPP81172 84 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 MRPS10P82664 201 aaKnown RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 WHAMMP3Q1A5X7 153 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 Q56UQ5 140 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 SSBP3-AS1Q7Z2R9 100 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 C10orf82Q8WW14 230 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 WFDC6Q9BQY6 131 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 SNRNP25Q9BV90 132 aaKnown RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 CYP4F30PQ9H0H9 118 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 SERP1Q9Y6X1 66 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 DOCK1Q14185 1865 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 MUC22E2RYF6 1773 aaPredicted RBP0.24□□□□□ -2.37
USP44-207ENST00000552237 ABCA2Q9BZC7 2435 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 PRDM2Q13029 1718 aa0.24□□□□□ -2.37
USP44-207ENST00000552237 EIF4G3O43432 1585 aaKnown RBP0.23□□□□□ -2.37
USP44-207ENST00000552237 UBR5O95071 2799 aaPredicted RBP0.23□□□□□ -2.37
USP44-207ENST00000552237 PTPRMP28827 1452 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 SHANK2Q9UPX8 1470 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 PSME4Q14997 1843 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 ZNF815PA8K554 130 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 UQCR11O14957 56 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 TNFP01375 233 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 RBM3P98179 157 aaKnown RBP0.23□□□□□ -2.37
USP44-207ENST00000552237 MEIG1Q5JSS6 88 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 Q6AWC8 147 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 Q8IZM0 81 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 SVBPQ8N300 66 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.23□□□□□ -2.37
USP44-207ENST00000552237 AMELXQ99217 191 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 MGST2Q99735 147 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 LINC00470Q9BZP3 86 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 DYNLRB1Q9NP97 96 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 ADGRB1O14514 1584 aa0.23□□□□□ -2.37
USP44-207ENST00000552237 URB1O60287 2271 aaKnown RBP0.22□□□□□ -2.37
USP44-207ENST00000552237 ARAP2Q8WZ64 1704 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 EFCAB10A6NFE3 127 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 HCG22E2RYF7 251 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 M0R135 149 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 GNG7O60262 68 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 SNAPC5O75971 98 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 MGPP08493 103 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 KRTDAPP60985 99 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 DEFB109BQ30KR1 87 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 MRPL54Q6P161 138 aaKnown RBP0.22□□□□□ -2.37
USP44-207ENST00000552237 BAGE2Q86Y30 109 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 DPH3Q96FX2 82 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 Q96NJ1 140 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 AGPAT4-IT1Q9H0P7 198 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 NHSL1Q5SYE7 1610 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 USF3Q68DE3 2245 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 SPTA1P02549 2419 aa0.22□□□□□ -2.37
USP44-207ENST00000552237 CASKIN1Q8WXD9 1431 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 OTOGQ6ZRI0 2925 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 A0A087WTM6 91 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 SPAARA0A1B0GVQ0 90 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 F8VRH5 84 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 COX6CP09669 75 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 TRAPPC2P0DI81 140 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 TRAPPC2BP0DI82 140 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 CCL18P55774 89 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 UBE2L3P68036 154 aaKnown RBP0.21□□□□□ -2.38
USP44-207ENST00000552237 BTG2P78543 158 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 CATR1Q13166 79 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms