RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PMCHL1Q16048 86 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 FA2HQ7L5A8 372 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 FAM19A2Q8N3H0 131 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 DEFB104AQ8WTQ1 72 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 CHCHD1Q96BP2 118 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 ZMAT4Q9H898 229 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 DNAH9Q9NYC9 4486 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 IGHV1-24A0A0C4DH33 117 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 GAGE12JA6NER3 117 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 TSHBP01222 138 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 NHLRC4P0CG21 123 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 PMCHP20382 165 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 UBE2D3P61077 147 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 UBE2D2P62837 147 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 GAGE1Q13065 139 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 GAGE4Q13068 117 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 GAGE5Q13069 117 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 RHOHQ15669 191 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 Q6ZTC4 211 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 ZNRF2Q8NHG8 242 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 PHLDA1Q8WV24 401 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 VSIG2Q96IQ7 327 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 HIST1H2BLQ99880 126 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 HHLA3Q9XRX5 114 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
DEPDC4-207ENST00000549249 TRBV7-3A0A075B6L6 115 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 IGHV3-38A0A0C4DH36 116 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 F5H768 121 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 HSBP1O75506 76 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 FABP4P15090 132 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 HTN3P15516 51 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 AMTP48728 403 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 RPL36AP83881 106 aaKnown RBP5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 RPL36ALQ969Q0 106 aaKnown RBP5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 PRADC1Q9BSG0 188 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 PRO0255Q9UI72 69 aa5.65□□□□□ -1.5
DEPDC4-207ENST00000549249 A0A0J9YY99 117 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 I3L3M4 83 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 VCYO14598 125 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 GYPEP15421 78 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 LAGE3Q14657 143 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 LINC00173Q6ZV60 143 aa5.64□□□□□ -1.51
DEPDC4-207ENST00000549249 TRAV26-1A0A087WT03 109 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 K7EMI3 77 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 HBDP02042 147 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 S100A2P29034 98 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 FCER1GP30273 86 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 NTM-AS1Q6ZSK4 140 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 TMEM18Q96B42 140 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 KIR2DL4Q99706 377 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 CHCHD7Q9BUK0 85 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
DEPDC4-207ENST00000549249 RPL39P62891 51 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 DAZ4Q86SG3 579 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 OR10D4PQ8NGN7 298 aa5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 DAZ3Q9NR90 486 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-207ENST00000549249 DEFB131BA0A096LNP1 70 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 A0A096LPF7 62 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 LEPROTL1O95214 131 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 NUDT3O95989 172 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 BTF3P20290 206 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 COTL1Q14019 142 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 C20orf203Q8NBC4 194 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
DEPDC4-207ENST00000549249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 TRAV10A0A0B4J240 114 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 H3BNG1 76 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 C3orf84H3BNL1 204 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 C3orf79P0CE67 100 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 CYSLTR1Q9Y271 337 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 ICOSQ9Y6W8 199 aa5.6□□□□□ -1.51
DEPDC4-207ENST00000549249 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 AKR1D1P51857 326 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 MRPL23Q16540 153 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 Q8N976 141 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 FAM104AQ969W3 186 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 IFI27L1Q96BM0 104 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 GTSF1LQ9H1H1 148 aa5.59□□□□□ -1.51
DEPDC4-207ENST00000549249 TRBV6-8A0A0A6YYG3 113 aa5.58□□□□□ -1.52
DEPDC4-207ENST00000549249 KRTDAPP60985 99 aa5.58□□□□□ -1.52
DEPDC4-207ENST00000549249 PYY3Q5JQD4 70 aa5.58□□□□□ -1.52
DEPDC4-207ENST00000549249 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
DEPDC4-207ENST00000549249 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
DEPDC4-207ENST00000549249 TRBV25-1A0A075B6N4 114 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 ATP5LO75964 103 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 TMEM97Q5BJF2 176 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms