RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 AMMECR1LQ6DCA0 310 aa6.28□□□□□ -1.4
GCN1-205ENST00000548821 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
GCN1-205ENST00000548821 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
GCN1-205ENST00000548821 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
GCN1-205ENST00000548821 NKX2-5P52952 324 aaPredicted RBP6.27□□□□□ -1.41
GCN1-205ENST00000548821 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
GCN1-205ENST00000548821 BLOC1S1P78537 153 aa6.27□□□□□ -1.41
GCN1-205ENST00000548821 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
GCN1-205ENST00000548821 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
GCN1-205ENST00000548821 RAB19A4D1S5 217 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 A8MWL6 223 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 LCE2BO14633 110 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 PRSS1P07477 247 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
GCN1-205ENST00000548821 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 TCTE3Q8IZS6 198 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 NUDT10Q8NFP7 164 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 NUDT11Q96G61 164 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
GCN1-205ENST00000548821 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
GCN1-205ENST00000548821 TMEM250H0YL14 139 aa6.25□□□□□ -1.41
GCN1-205ENST00000548821 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
GCN1-205ENST00000548821 CTRLP40313 264 aa6.25□□□□□ -1.41
GCN1-205ENST00000548821 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
GCN1-205ENST00000548821 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
GCN1-205ENST00000548821 GATCO43716 136 aaKnown RBP6.24□□□□□ -1.41
GCN1-205ENST00000548821 PPP1R17O96001 155 aa6.24□□□□□ -1.41
GCN1-205ENST00000548821 APCSP02743 223 aa6.24□□□□□ -1.41
GCN1-205ENST00000548821 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
GCN1-205ENST00000548821 C7orf33Q8WU49 177 aa6.24□□□□□ -1.41
GCN1-205ENST00000548821 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
GCN1-205ENST00000548821 I3L3M4 83 aa6.23□□□□□ -1.41
GCN1-205ENST00000548821 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
GCN1-205ENST00000548821 PMCHP20382 165 aa6.23□□□□□ -1.41
GCN1-205ENST00000548821 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
GCN1-205ENST00000548821 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
GCN1-205ENST00000548821 HERC1Q15751 4861 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 RPS10P46783 165 aaKnown RBP6.22□□□□□ -1.41
GCN1-205ENST00000548821 CT83Q5H943 113 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
GCN1-205ENST00000548821 Q6ZRU5 148 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 OCC1Q8TAD7 63 aa6.22□□□□□ -1.41
GCN1-205ENST00000548821 CCL25O15444 150 aa6.21□□□□□ -1.42
GCN1-205ENST00000548821 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
GCN1-205ENST00000548821 SS18Q15532 418 aa6.21□□□□□ -1.42
GCN1-205ENST00000548821 GFRA4Q9GZZ7 299 aa6.21□□□□□ -1.42
GCN1-205ENST00000548821 ST20Q9HBF5 79 aa6.21□□□□□ -1.42
GCN1-205ENST00000548821 FAT1Q14517 4588 aa6.21□□□□□ -1.42
GCN1-205ENST00000548821 IGLV4-60A0A075B6I1 120 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 GAGE12HA6NDE8 117 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 AKAP14Q86UN6 197 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 ISOC2Q96AB3 205 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 TMEM18Q96B42 140 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
GCN1-205ENST00000548821 EIF5A2Q9GZV4 153 aaKnown RBP6.2□□□□□ -1.42
GCN1-205ENST00000548821 RNASE7Q9H1E1 156 aaKnown RBP6.2□□□□□ -1.42
GCN1-205ENST00000548821 TRBV20OR9-2A0A075B6H5 130 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 A0A1B0GUT8 65 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 TCAPO15273 167 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 RIGQ13278 110 aa6.19□□□□□ -1.42
GCN1-205ENST00000548821 CIRBPQ14011 172 aaKnown RBP6.19□□□□□ -1.42
GCN1-205ENST00000548821 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 VCYO14598 125 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 FGF6P10767 208 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 CEBPGP53567 150 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 TSKUQ8WUA8 353 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
GCN1-205ENST00000548821 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 SMIM7Q9BQ49 75 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
GCN1-205ENST00000548821 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
GCN1-205ENST00000548821 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 K7EN84 100 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 PPP1R2P9O14990 202 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 FCER1GP30273 86 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
GCN1-205ENST00000548821 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
GCN1-205ENST00000548821 A0A087WYN8 130 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
GCN1-205ENST00000548821 TRAV26-2A0A0B4J265 109 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 A0A1B0GW15 77 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 C1orf196B1AJZ1 125 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 S100A8P05109 93 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 MALP21145 153 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 MAJINQ3KP22 176 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 LYPD6BQ8NI32 183 aa6.16□□□□□ -1.42
GCN1-205ENST00000548821 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms