RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LRRC18Q8N456 261 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 HYLS1Q96M11 299 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 LINC01600Q96MT4 127 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 POPDC3Q9HBV1 291 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 BOKQ9UMX3 212 aaPredicted RBP0.05□□□□□ -2.4
CCDC38-206ENST00000548771 TRAV17A0A0B4J275 112 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 M0R2T5 61 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 QRFPP83859 136 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 RBM3P98179 157 aaKnown RBP0.04□□□□□ -2.4
CCDC38-206ENST00000548771 WFDC2Q14508 124 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 ASB16-AS1Q495Z4 193 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 OCIAD2Q56VL3 154 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 NCMAPQ5T1S8 102 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 TMEM14EPQ6UXP3 125 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 PATE2Q6UY27 113 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 NDUFA11Q86Y39 141 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 C10orf82Q8WW14 230 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 ZHX1-C8orf76Q96EF9 292 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 PRAP1Q96NZ9 151 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 C9orf16Q9BUW7 83 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 PROK2Q9HC23 129 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 NINQ8N4C6 2090 aa0.04□□□□□ -2.4
CCDC38-206ENST00000548771 FAM92AA1XBS5 289 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB4AO15263 64 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 IGF2P01344 180 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 CRHP06850 196 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 MT1XP80297 61 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB136Q30KP8 78 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB110Q30KQ9 67 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 KRTAP6-2Q3LI66 62 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 LYG2Q86SG7 212 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 MT1MQ8N339 61 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 OR4S1Q8NGB4 309 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 NAT14Q8WUY8 206 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 PLAC4Q8WY50 150 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 CACYBPQ9HB71 228 aaKnown RBP0.03□□□□□ -2.4
CCDC38-206ENST00000548771 CBLN4Q9NTU7 201 aa0.03□□□□□ -2.4
CCDC38-206ENST00000548771 A0A087WTM6 91 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 NBDYA0A0U1RRE5 68 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 DUXBA0A1W2PPF3 345 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 hDV103S1A0JD37 113 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 GPR31O00270 319 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 NDUFC2O95298 119 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 SERPINA1P01009 418 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 TFF1P04155 84 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 MT1EP04732 61 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 CAPZBP47756 277 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 TMBIM6P55061 237 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 RPL37AP61513 92 aaKnown RBP0.02□□□□□ -2.41
CCDC38-206ENST00000548771 NCALDP61601 193 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 HSPE1P61604 102 aaKnown RBP0.02□□□□□ -2.41
CCDC38-206ENST00000548771 BLCAPP62952 87 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 KLRD1Q13241 179 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 KRTAP19-8Q3LI54 63 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 TSLPQ969D9 159 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 LINC00846Q9NV44 126 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 STOML2Q9UJZ1 356 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 ARL2BPQ9Y2Y0 163 aa0.02□□□□□ -2.41
CCDC38-206ENST00000548771 C9orf170A2RU37 121 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 ATP6V1G2-DDX39BF2Z307 99 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 H3BSH0 61 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 RER1O15258 196 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 TNFP01375 233 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 IFNA14P01570 189 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 IFNA6P05013 189 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 IFNA4P05014 189 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 CST2P09228 141 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 CXCL1P09341 107 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 DCDP81605 110 aaKnown RBP0.01□□□□□ -2.41
CCDC38-206ENST00000548771 SPCS2Q15005 226 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 DEFB135Q30KP9 77 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 AKIRIN2Q53H80 203 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 COX14Q96I36 57 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 PHB2Q99623 299 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 CENPHQ9H3R5 247 aa0.01□□□□□ -2.41
CCDC38-206ENST00000548771 E7EQ34 232 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 H3BUX3 64 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 AIPO00170 330 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 LYRM1O43325 122 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 C1QBP02746 253 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 MT1GP13640 62 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 INSL3P51460 131 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 ERVS71-1P61550 626 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 BTG2P78543 158 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 TFAMQ00059 246 aaKnown RBP0□□□□□ -2.41
CCDC38-206ENST00000548771 PXT1Q8NFP0 134 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 MYOZ3Q8TDC0 251 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 MT1LQ93083 61 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 DGCR14Q96DF8 476 aaKnown RBP0□□□□□ -2.41
CCDC38-206ENST00000548771 LXNQ9BS40 222 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 MAP1LC3BQ9GZQ8 125 aa0□□□□□ -2.41
CCDC38-206ENST00000548771 TCHHQ07283 1943 aa-0.01□□□□□ -2.41
CCDC38-206ENST00000548771 DEFB131BA0A096LNP1 70 aa-0.01□□□□□ -2.41
CCDC38-206ENST00000548771 K7ERJ3 54 aa-0.01□□□□□ -2.41
CCDC38-206ENST00000548771 IGHV3-33P01772 117 aa-0.01□□□□□ -2.41
CCDC38-206ENST00000548771 TCTAP57738 103 aa-0.01□□□□□ -2.41
CCDC38-206ENST00000548771 ARF6P62330 175 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms