RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
PRPF40B-207ENST00000548399 BIRC6Q9NR09 4857 aa9.32□□□□□ -0.92
PRPF40B-207ENST00000548399 A0A087WX48 190 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 PPBPP02775 128 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 TRGC2P03986 189 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 LAGE3Q14657 143 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 NIT1Q86X76 327 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 Q8N3U1 123 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
PRPF40B-207ENST00000548399 CKS2P33552 79 aa9.3□□□□□ -0.92
PRPF40B-207ENST00000548399 KIAA1644Q3SXP7 199 aa9.3□□□□□ -0.92
PRPF40B-207ENST00000548399 CHCHD7Q9BUK0 85 aa9.3□□□□□ -0.92
PRPF40B-207ENST00000548399 Q9HAA7 133 aa9.3□□□□□ -0.92
PRPF40B-207ENST00000548399 TRAV26-2A0A0B4J265 109 aa9.29□□□□□ -0.92
PRPF40B-207ENST00000548399 D6R8Y8 96 aa9.29□□□□□ -0.92
PRPF40B-207ENST00000548399 EREGO14944 169 aa9.29□□□□□ -0.92
PRPF40B-207ENST00000548399 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
PRPF40B-207ENST00000548399 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
PRPF40B-207ENST00000548399 TRBV25-1A0A075B6N4 114 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 SMKR1H3BMG3 65 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 PSCAO43653 123 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 PPP1R17O96001 155 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 PKIAP61925 76 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
PRPF40B-207ENST00000548399 PHOX2AO14813 284 aa9.27□□□□□ -0.93
PRPF40B-207ENST00000548399 NCR2O95944 276 aa9.27□□□□□ -0.93
PRPF40B-207ENST00000548399 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
PRPF40B-207ENST00000548399 ALKBH7Q9BT30 221 aaPredicted RBP9.27□□□□□ -0.93
PRPF40B-207ENST00000548399 LAMTOR2Q9Y2Q5 125 aa9.27□□□□□ -0.93
PRPF40B-207ENST00000548399 PKD1P98161 4303 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 IGHV1-24A0A0C4DH33 117 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 IQCJQ1A5X6 159 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 RPL39LQ96EH5 51 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 TM2D2Q9BX73 214 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 KLK12Q9UKR0 248 aa9.26□□□□□ -0.93
PRPF40B-207ENST00000548399 A0A087WTM6 91 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 COTL1Q14019 142 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 NRACQ8N912 160 aa9.25□□□□□ -0.93
PRPF40B-207ENST00000548399 TRBV6-5A0A0K0K1A5 114 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 NPYP01303 97 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 GAGE6Q13070 117 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 RMI2Q96E14 147 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
PRPF40B-207ENST00000548399 AMTP48728 403 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 KRTAP10-2P60368 255 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 Q8N976 141 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
PRPF40B-207ENST00000548399 SDHAF1A6NFY7 115 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 CRPP02741 224 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 RAB5BP61020 215 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 RBX1P62877 108 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 Q0VG73 95 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 DEFB104AQ8WTQ1 72 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
PRPF40B-207ENST00000548399 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 UBE2L6O14933 153 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 C18orf32Q8TCD1 76 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
PRPF40B-207ENST00000548399 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 I3L3M4 83 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 VCYO14598 125 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 POLR2KP53803 58 aaKnown RBP9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 CDPF1Q6NVV7 123 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 TMEM70Q9BUB7 260 aa9.2□□□□□ -0.94
PRPF40B-207ENST00000548399 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 PMCHP20382 165 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 PRSS3P2Q8NHM4 247 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
PRPF40B-207ENST00000548399 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms