RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 IGHV4-59P01825 116 aa11.27□□□□□ -0.6
BRF1-211ENST00000547530 RPL13AP40429 203 aaKnown RBP11.27□□□□□ -0.6
BRF1-211ENST00000547530 UBE2D3P61077 147 aa11.27□□□□□ -0.6
BRF1-211ENST00000547530 UBE2D2P62837 147 aa11.27□□□□□ -0.6
BRF1-211ENST00000547530 IGHV1-69DA0A0B4J2H0 117 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 IGHV1-69P01742 117 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.61
BRF1-211ENST00000547530 CFHR3Q02985 330 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 H3BMM0 161 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 POLR2KP53803 58 aaKnown RBP11.27□□□□□ -0.61
BRF1-211ENST00000547530 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
BRF1-211ENST00000547530 A0A0J9YXY3 114 aa11.26□□□□□ -0.61
BRF1-211ENST00000547530 GAGE5Q13069 117 aa11.26□□□□□ -0.61
BRF1-211ENST00000547530 GAGE6Q13070 117 aa11.26□□□□□ -0.61
BRF1-211ENST00000547530 EBI3Q14213 229 aa11.26□□□□□ -0.61
BRF1-211ENST00000547530 LINC01587Q99440 93 aa11.26□□□□□ -0.61
BRF1-211ENST00000547530 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
BRF1-211ENST00000547530 TMEM262E9PQX1 116 aa11.25□□□□□ -0.61
BRF1-211ENST00000547530 GNLYP22749 145 aa11.25□□□□□ -0.61
BRF1-211ENST00000547530 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
BRF1-211ENST00000547530 XCL2Q9UBD3 114 aa11.25□□□□□ -0.61
BRF1-211ENST00000547530 MXRA5Q9NR99 2828 aa11.25□□□□□ -0.61
BRF1-211ENST00000547530 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 IFITM1P13164 125 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 LINC00315P59091 139 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 I3L3M4 83 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 M0QY20 66 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 KLRB1Q12918 225 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 C11orf71Q6IPW1 123 aa11.24□□□□□ -0.61
BRF1-211ENST00000547530 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
BRF1-211ENST00000547530 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
BRF1-211ENST00000547530 NDUFV3P56181 108 aaKnown RBP11.23□□□□□ -0.61
BRF1-211ENST00000547530 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
BRF1-211ENST00000547530 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
BRF1-211ENST00000547530 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 GAGE7O76087 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 GAGE4Q13068 117 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 IGHV4-30-2A0A087WSY4 118 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 U3KQE9 123 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 TMEM223A0PJW6 202 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 LEPROTO15243 131 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 AVPP01185 164 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 TMEM263Q8WUH6 116 aaKnown RBP11.22□□□□□ -0.61
BRF1-211ENST00000547530 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
BRF1-211ENST00000547530 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
BRF1-211ENST00000547530 NXPH4O95158 308 aa11.21□□□□□ -0.62
BRF1-211ENST00000547530 HERV-K104P63124 156 aa11.21□□□□□ -0.62
BRF1-211ENST00000547530 Q9HAA7 133 aa11.21□□□□□ -0.62
BRF1-211ENST00000547530 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.62
BRF1-211ENST00000547530 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.62
BRF1-211ENST00000547530 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
BRF1-211ENST00000547530 CCL19Q99731 98 aa11.2□□□□□ -0.62
BRF1-211ENST00000547530 SLURP1P55000 103 aa11.2□□□□□ -0.62
BRF1-211ENST00000547530 Q6ZSN1 163 aa11.2□□□□□ -0.62
BRF1-211ENST00000547530 Q9H8V8 135 aa11.2□□□□□ -0.62
BRF1-211ENST00000547530 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.19□□□□□ -0.62
BRF1-211ENST00000547530 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
BRF1-211ENST00000547530 SOCS3O14543 225 aa11.19□□□□□ -0.62
BRF1-211ENST00000547530 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
BRF1-211ENST00000547530 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
BRF1-211ENST00000547530 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
BRF1-211ENST00000547530 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 LINC00467Q9BRT7 94 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 TRGV11A0A075B6L2 103 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 TRBV27A0A0K0K1C4 114 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 H7C423 109 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
BRF1-211ENST00000547530 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 A0A087WW49 117 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 DCANP1Q8TF63 244 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 A0A0J9YX75 114 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 DYNLRB2Q8TF09 96 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 AMELXQ99217 191 aa11.16□□□□□ -0.62
BRF1-211ENST00000547530 DOPEY1Q5JWR5 2465 aa11.15□□□□□ -0.62
BRF1-211ENST00000547530 KLLNB2CW77 178 aa11.14□□□□□ -0.63
BRF1-211ENST00000547530 LGALS9O00182 355 aa11.14□□□□□ -0.63
BRF1-211ENST00000547530 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
BRF1-211ENST00000547530 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
BRF1-211ENST00000547530 PFN2P35080 140 aa11.14□□□□□ -0.63
BRF1-211ENST00000547530 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
BRF1-211ENST00000547530 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
BRF1-211ENST00000547530 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms