RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DNAJC30Q96LL9 226 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 CHCHD7Q9BUK0 85 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 PRSS2P07478 247 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1A1P0DJD3 496 aaKnown RBP6.39□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1CP0DJD4 496 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 ATP5J2P56134 94 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 SYNJ2BPP57105 145 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1FQ15415 496 aaKnown RBP6.39□□□□□ -1.39
TDP1-204ENST00000545686 DEFB121Q5J5C9 76 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
TDP1-204ENST00000545686 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 TEX49A0A1B0GTD5 131 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 H7C423 109 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 LST1O00453 97 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 GAGE5Q13069 117 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 GAGE6Q13070 117 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 LINC00467Q9BRT7 94 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 BEX4Q9NWD9 120 aaPredicted RBP6.38□□□□□ -1.39
TDP1-204ENST00000545686 NDUFA1O15239 70 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 IGHV4-59P01825 116 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
TDP1-204ENST00000545686 TIRAPP58753 221 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 UBE2E2Q96LR5 201 aa6.38□□□□□ -1.39
TDP1-204ENST00000545686 AVPP01185 164 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 HOXD3P31249 432 aaPredicted RBP6.37□□□□□ -1.39
TDP1-204ENST00000545686 LY6DQ14210 128 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 C10orf99Q6UWK7 81 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 SORL1Q92673 2214 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 TRAV4A0A0B4J268 109 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 IGHV3-53P01767 116 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 NHLRC4P0CG21 123 aaPredicted RBP6.37□□□□□ -1.39
TDP1-204ENST00000545686 GNLYP22749 145 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 DSCR9P59020 149 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 DEFB112Q30KQ8 113 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
TDP1-204ENST00000545686 DUX3Q96PT4 197 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 VPS13CQ709C8 3753 aa6.37□□□□□ -1.39
TDP1-204ENST00000545686 IGHV3-73A0A0B4J1V6 119 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 PROK1P58294 105 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 PRORYQ9H606 182 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 J3QLI3 93 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 CRLF1O75462 422 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
TDP1-204ENST00000545686 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 C15orf53Q8NAA6 179 aa6.36□□□□□ -1.39
TDP1-204ENST00000545686 BEAN1Q3B7T3 259 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
TDP1-204ENST00000545686 DUX5Q96PT3 197 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.35□□□□□ -1.39
TDP1-204ENST00000545686 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
TDP1-204ENST00000545686 KNCNA6PVL3 124 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 DEFB131AP59861 70 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 VPREB3Q9UKI3 123 aa6.35□□□□□ -1.39
TDP1-204ENST00000545686 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.39
TDP1-204ENST00000545686 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.39
TDP1-204ENST00000545686 HERVK_113P63121 156 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 Q6ZSN1 163 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 CSPG4Q6UVK1 2322 aa6.34□□□□□ -1.39
TDP1-204ENST00000545686 GAGE12JA6NER3 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 RS1O15537 224 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 GAGE7O76087 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 GAGE12FP0CL80 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 GAGE12GP0CL81 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 GAGE12IP0CL82 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 GAGE4Q13068 117 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 TMEM101Q96IK0 257 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 CDKN2A-AS1Q9UH64 79 aa6.34□□□□□ -1.4
TDP1-204ENST00000545686 A8MZ25 164 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 ACYP1P07311 99 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 HTN1P15515 57 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 ZNF702PQ9H963 129 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 INSP01308 110 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 NPC2P61916 151 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 PEMTQ9UBM1 199 aa6.33□□□□□ -1.4
TDP1-204ENST00000545686 CRYBG3Q68DQ2 2970 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 Q6ZSV7 163 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 CITED2Q99967 270 aaPredicted RBP6.32□□□□□ -1.4
TDP1-204ENST00000545686 Q9UF83 564 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 COX7A2LO14548 114 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 MAP6D1Q9H9H5 199 aa6.32□□□□□ -1.4
TDP1-204ENST00000545686 CSDC2Q9Y534 153 aaKnown RBP6.32□□□□□ -1.4
TDP1-204ENST00000545686 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
TDP1-204ENST00000545686 B5MCH6 92 aa6.31□□□□□ -1.4
TDP1-204ENST00000545686 LINC01587Q99440 93 aa6.31□□□□□ -1.4
TDP1-204ENST00000545686 FSHBP01225 129 aa6.31□□□□□ -1.4
TDP1-204ENST00000545686 SLURP1P55000 103 aa6.31□□□□□ -1.4
TDP1-204ENST00000545686 LINC00242Q5T6M2 205 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms