RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 AMTP48728 403 aa12.91□□□□□ -0.34
CHD4-213ENST00000545584 C20orf203Q8NBC4 194 aa12.91□□□□□ -0.34
CHD4-213ENST00000545584 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
CHD4-213ENST00000545584 DNAH8Q96JB1 4490 aa12.91□□□□□ -0.34
CHD4-213ENST00000545584 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
CHD4-213ENST00000545584 J3QL48 77 aa12.9□□□□□ -0.34
CHD4-213ENST00000545584 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
CHD4-213ENST00000545584 KRTAP26-1Q6PEX3 210 aa12.9□□□□□ -0.34
CHD4-213ENST00000545584 CLRN3Q8NCR9 226 aa12.9□□□□□ -0.34
CHD4-213ENST00000545584 A0A1B0GVG6 124 aa12.89□□□□□ -0.35
CHD4-213ENST00000545584 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
CHD4-213ENST00000545584 CEBPGP53567 150 aa12.88□□□□□ -0.35
CHD4-213ENST00000545584 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
CHD4-213ENST00000545584 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 A8MWL6 223 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 TEX261Q6UWH6 196 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 C9orf163Q8N9P6 203 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
CHD4-213ENST00000545584 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
CHD4-213ENST00000545584 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
CHD4-213ENST00000545584 hDV102S1A0JD36 115 aa12.85□□□□□ -0.35
CHD4-213ENST00000545584 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
CHD4-213ENST00000545584 AP5S1Q9NUS5 200 aa12.85□□□□□ -0.35
CHD4-213ENST00000545584 NCR2O95944 276 aa12.84□□□□□ -0.35
CHD4-213ENST00000545584 AMMECR1LQ6DCA0 310 aa12.84□□□□□ -0.35
CHD4-213ENST00000545584 GFRA4Q9GZZ7 299 aa12.84□□□□□ -0.35
CHD4-213ENST00000545584 MYCBP2O75592 4640 aa12.83□□□□□ -0.36
CHD4-213ENST00000545584 CT83Q5H943 113 aa12.83□□□□□ -0.36
CHD4-213ENST00000545584 RPL39LQ96EH5 51 aaKnown RBP12.83□□□□□ -0.36
CHD4-213ENST00000545584 APCSP02743 223 aa12.82□□□□□ -0.36
CHD4-213ENST00000545584 FOXA3P55318 350 aaPredicted RBP12.82□□□□□ -0.36
CHD4-213ENST00000545584 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
CHD4-213ENST00000545584 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
CHD4-213ENST00000545584 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
CHD4-213ENST00000545584 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
CHD4-213ENST00000545584 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
CHD4-213ENST00000545584 HERC1Q15751 4861 aa12.8□□□□□ -0.36
CHD4-213ENST00000545584 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
CHD4-213ENST00000545584 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
CHD4-213ENST00000545584 KRTAP29-1A8MX34 341 aaPredicted RBP12.8□□□□□ -0.36
CHD4-213ENST00000545584 H7C423 109 aa12.8□□□□□ -0.36
CHD4-213ENST00000545584 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
CHD4-213ENST00000545584 ZNF727A8MUV8 499 aa12.79□□□□□ -0.36
CHD4-213ENST00000545584 PMCHP20382 165 aa12.79□□□□□ -0.36
CHD4-213ENST00000545584 SDIM1Q6ZPB5 146 aa12.79□□□□□ -0.36
CHD4-213ENST00000545584 GAGE12HA6NDE8 117 aa12.78□□□□□ -0.36
CHD4-213ENST00000545584 I3L3M4 83 aa12.78□□□□□ -0.36
CHD4-213ENST00000545584 RPL37AP61513 92 aaKnown RBP12.78□□□□□ -0.36
CHD4-213ENST00000545584 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
CHD4-213ENST00000545584 TSKUQ8WUA8 353 aa12.78□□□□□ -0.36
CHD4-213ENST00000545584 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
CHD4-213ENST00000545584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
CHD4-213ENST00000545584 IGHV3-64A0A075B6Q5 118 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.77□□□□□ -0.37
CHD4-213ENST00000545584 A0A1B0GUT8 65 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 IGKV2-29A2NJV5 120 aaPredicted RBP12.77□□□□□ -0.37
CHD4-213ENST00000545584 HIGD1CA8MV81 97 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 FGF6P10767 208 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 KRTAP10-4P60372 401 aaPredicted RBP12.77□□□□□ -0.37
CHD4-213ENST00000545584 BTF3L4Q96K17 158 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 OSTCQ9NRP0 149 aa12.77□□□□□ -0.37
CHD4-213ENST00000545584 TRBV6-5A0A0K0K1A5 114 aa12.76□□□□□ -0.37
CHD4-213ENST00000545584 FAM231BA6NCW3 169 aa12.76□□□□□ -0.37
CHD4-213ENST00000545584 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
CHD4-213ENST00000545584 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
CHD4-213ENST00000545584 SRP19P09132 144 aaKnown RBP12.75□□□□□ -0.37
CHD4-213ENST00000545584 ZNF25P17030 456 aaPredicted RBP12.75□□□□□ -0.37
CHD4-213ENST00000545584 TMEM101Q96IK0 257 aa12.75□□□□□ -0.37
CHD4-213ENST00000545584 TMEM191AQ9H0A3 160 aa12.75□□□□□ -0.37
CHD4-213ENST00000545584 CHCHD10Q8WYQ3 142 aaPredicted RBP12.74□□□□□ -0.37
CHD4-213ENST00000545584 PANO1I0J062 215 aa12.73□□□□□ -0.37
CHD4-213ENST00000545584 OXTP01178 125 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 SLPIP03973 132 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 RIGQ13278 110 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 OR5A1Q8NGJ0 315 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
CHD4-213ENST00000545584 RAB4AP20338 218 aa12.71□□□□□ -0.37
CHD4-213ENST00000545584 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
CHD4-213ENST00000545584 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
CHD4-213ENST00000545584 RNF185Q96GF1 192 aa12.71□□□□□ -0.37
CHD4-213ENST00000545584 TMEM242Q9NWH2 141 aa12.71□□□□□ -0.37
CHD4-213ENST00000545584 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
CHD4-213ENST00000545584 ESDP10768 282 aa12.7□□□□□ -0.38
CHD4-213ENST00000545584 RPS10P46783 165 aaKnown RBP12.7□□□□□ -0.38
CHD4-213ENST00000545584 TMEM241Q24JQ0 296 aa12.7□□□□□ -0.38
CHD4-213ENST00000545584 HIGD2BQ4VC39 106 aa12.7□□□□□ -0.38
CHD4-213ENST00000545584 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
CHD4-213ENST00000545584 TSHBP01222 138 aa12.69□□□□□ -0.38
CHD4-213ENST00000545584 V9GYV3 84 aa12.69□□□□□ -0.38
CHD4-213ENST00000545584 PPP1R17O96001 155 aa12.68□□□□□ -0.38
CHD4-213ENST00000545584 POLR2KP53803 58 aaKnown RBP12.68□□□□□ -0.38
CHD4-213ENST00000545584 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
CHD4-213ENST00000545584 ISOC2Q96AB3 205 aa12.68□□□□□ -0.38
CHD4-213ENST00000545584 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
CHD4-213ENST00000545584 A0A087WYN8 130 aa12.67□□□□□ -0.38
CHD4-213ENST00000545584 TRBV27A0A0K0K1C4 114 aa12.67□□□□□ -0.38
CHD4-213ENST00000545584 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
CHD4-213ENST00000545584 CHTF8P0CG12 524 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms