RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 MAP1LC3B2A6NCE7 125 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 H7C423 109 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 UBE2L6O14933 153 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 AMTP48728 403 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 PTTG1IPP53801 180 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 SSTP61278 116 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 COTL1Q14019 142 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 STOML3Q8TAV4 291 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 MAP1LC3BQ9GZQ8 125 aa8.94□□□□□ -0.98
RTN3-214ENST00000545432 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 Q5BKY6 102 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 AKR1C8PQ5T2L2 129 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 BATF3Q9NR55 127 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 ALG5Q9Y673 324 aa8.93□□□□□ -0.98
RTN3-214ENST00000545432 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
RTN3-214ENST00000545432 PAGE4O60829 102 aa8.92□□□□□ -0.98
RTN3-214ENST00000545432 MGPP08493 103 aa8.92□□□□□ -0.98
RTN3-214ENST00000545432 CACNG7P62955 275 aa8.92□□□□□ -0.98
RTN3-214ENST00000545432 CARD19Q96LW7 228 aa8.92□□□□□ -0.98
RTN3-214ENST00000545432 TRAV26-2A0A0B4J265 109 aa8.91□□□□□ -0.98
RTN3-214ENST00000545432 NTF3P20783 257 aa8.91□□□□□ -0.98
RTN3-214ENST00000545432 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 SCO2A0A1W2PP80 73 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 NCR2O95944 276 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 SYCNQ0VAF6 134 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 TMUB2Q71RG4 321 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
RTN3-214ENST00000545432 IGLV1-50A0A075B6I6 118 aa8.89□□□□□ -0.99
RTN3-214ENST00000545432 F2Z2F3 143 aa8.89□□□□□ -0.99
RTN3-214ENST00000545432 MBD3L1Q8WWY6 194 aa8.89□□□□□ -0.99
RTN3-214ENST00000545432 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
RTN3-214ENST00000545432 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 C19orf71A6NCJ1 209 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 GIPP09681 153 aaPredicted RBP8.88□□□□□ -0.99
RTN3-214ENST00000545432 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 RPS20P60866 119 aaKnown RBP8.88□□□□□ -0.99
RTN3-214ENST00000545432 Q6ZNX1 250 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 CYTL1Q9NRR1 136 aa8.88□□□□□ -0.99
RTN3-214ENST00000545432 MT-ND6P03923 174 aa8.87□□□□□ -0.99
RTN3-214ENST00000545432 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
RTN3-214ENST00000545432 TRGC1P0CF51 173 aa8.87□□□□□ -0.99
RTN3-214ENST00000545432 FGF6P10767 208 aa8.87□□□□□ -0.99
RTN3-214ENST00000545432 ZNF25P17030 456 aaPredicted RBP8.87□□□□□ -0.99
RTN3-214ENST00000545432 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
RTN3-214ENST00000545432 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
RTN3-214ENST00000545432 H0Y9J4 135 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 CCL25O15444 150 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 XCL1P47992 114 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 C1orf137Q5JT78 98 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 AMMECR1LQ6DCA0 310 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 C9orf62Q8N4C0 152 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
RTN3-214ENST00000545432 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.85□□□□□ -0.99
RTN3-214ENST00000545432 FXYD6-FXYD2A0A087WZ82 144 aa8.85□□□□□ -0.99
RTN3-214ENST00000545432 IGKV2-29A2NJV5 120 aaPredicted RBP8.85□□□□□ -0.99
RTN3-214ENST00000545432 CAMPP49913 170 aa8.85□□□□□ -0.99
RTN3-214ENST00000545432 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
RTN3-214ENST00000545432 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
RTN3-214ENST00000545432 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 RPL35P42766 123 aaKnown RBP8.84□□□□□ -0.99
RTN3-214ENST00000545432 PRR4Q16378 134 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 RNASEKQ6P5S7 137 aaKnown RBP8.84□□□□□ -0.99
RTN3-214ENST00000545432 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 OR2D3Q8NGH3 330 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 ISOC2Q96AB3 205 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 TPPP3Q9BW30 176 aa8.84□□□□□ -0.99
RTN3-214ENST00000545432 IGLV4-69A0A075B6H9 119 aa8.83□□□□□ -1
RTN3-214ENST00000545432 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
RTN3-214ENST00000545432 ESDP10768 282 aa8.83□□□□□ -1
RTN3-214ENST00000545432 MEF2BQ02080 365 aaPredicted RBP8.83□□□□□ -1
RTN3-214ENST00000545432 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
RTN3-214ENST00000545432 PFDN1O60925 122 aa8.82□□□□□ -1
RTN3-214ENST00000545432 APOMO95445 188 aa8.82□□□□□ -1
RTN3-214ENST00000545432 SFT2D1Q8WV19 159 aa8.82□□□□□ -1
RTN3-214ENST00000545432 SMIM12Q96EX1 92 aa8.82□□□□□ -1
RTN3-214ENST00000545432 C2orf48Q96LS8 159 aa8.82□□□□□ -1
RTN3-214ENST00000545432 FAM210AQ96ND0 272 aa8.82□□□□□ -1
RTN3-214ENST00000545432 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
RTN3-214ENST00000545432 XKRY2A2RUG3 117 aa8.81□□□□□ -1
RTN3-214ENST00000545432 G3V3Q6 166 aa8.81□□□□□ -1
RTN3-214ENST00000545432 APCSP02743 223 aa8.81□□□□□ -1
RTN3-214ENST00000545432 BCL2P10415 239 aa8.81□□□□□ -1
RTN3-214ENST00000545432 CTRLP40313 264 aa8.81□□□□□ -1
RTN3-214ENST00000545432 RNF151Q2KHN1 245 aa8.81□□□□□ -1
RTN3-214ENST00000545432 MRPL52Q86TS9 123 aaKnown RBP8.81□□□□□ -1
RTN3-214ENST00000545432 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
RTN3-214ENST00000545432 MUC17Q685J3 4493 aa8.81□□□□□ -1
RTN3-214ENST00000545432 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
RTN3-214ENST00000545432 SS18Q15532 418 aa8.8□□□□□ -1
RTN3-214ENST00000545432 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
RTN3-214ENST00000545432 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
RTN3-214ENST00000545432 IFNA1P01562 189 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms