RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CAMPP49913 170 aa4.3□□□□□ -1.72
COPA-207ENST00000545284 SERF2P84101 59 aa4.3□□□□□ -1.72
COPA-207ENST00000545284 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
COPA-207ENST00000545284 SDHCQ99643 169 aaPredicted RBP4.3□□□□□ -1.72
COPA-207ENST00000545284 SEC22CQ9BRL7 303 aa4.3□□□□□ -1.72
COPA-207ENST00000545284 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
COPA-207ENST00000545284 IGKV3OR2-268A0A0C4DH90 116 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 LTAP01374 205 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 ZNF25P17030 456 aaPredicted RBP4.29□□□□□ -1.72
COPA-207ENST00000545284 UBE2G1P62253 170 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 RASL11AQ6T310 242 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 CD164L2Q6UWJ8 174 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 NUP35Q8NFH5 326 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 OR5A1Q8NGJ0 315 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 PSMG3Q9BT73 122 aaPredicted RBP4.29□□□□□ -1.72
COPA-207ENST00000545284 NUDT15Q9NV35 164 aa4.29□□□□□ -1.72
COPA-207ENST00000545284 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.28□□□□□ -1.72
COPA-207ENST00000545284 CCL25O15444 150 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 LYRM1O43325 122 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 NCR2O95944 276 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 ESDP10768 282 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 NKX2-5P52952 324 aaPredicted RBP4.28□□□□□ -1.72
COPA-207ENST00000545284 MEF2BQ02080 365 aaPredicted RBP4.28□□□□□ -1.72
COPA-207ENST00000545284 LRRC37A5PQ49AS3 106 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
COPA-207ENST00000545284 LINC00526Q96FQ7 95 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 FAM210AQ96ND0 272 aa4.28□□□□□ -1.72
COPA-207ENST00000545284 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
COPA-207ENST00000545284 IGLV7-46A0A075B6I9 117 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 LINC00959A0A1B0GUT2 108 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 F8WDY8 70 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 PLA2G10O15496 165 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 ZNF861PO60384 105 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 S100A9P06702 114 aaKnown RBP4.27□□□□□ -1.73
COPA-207ENST00000545284 H2AFB2P0C5Z0 115 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 IL7P13232 177 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 XCL1P47992 114 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 PPP1R1CQ8WVI7 109 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 IMMP2LQ96T52 175 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 TNFSF18Q9UNG2 199 aa4.27□□□□□ -1.73
COPA-207ENST00000545284 C19orf71A6NCJ1 209 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 CCDC160A6NGH7 325 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 FAM74A7A6NL05 159 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 BCL2P10415 239 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 FHITP49789 147 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 RPL18AQ02543 176 aaKnown RBP4.26□□□□□ -1.73
COPA-207ENST00000545284 SS18Q15532 418 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 ASB16-AS1Q495Z4 193 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 RNASEKQ6P5S7 137 aaKnown RBP4.26□□□□□ -1.73
COPA-207ENST00000545284 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 BTF3L4Q96K17 158 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 CCDC32Q9BV29 185 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 SMIM3Q9BZL3 60 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
COPA-207ENST00000545284 MPC2O95563 127 aa4.25□□□□□ -1.73
COPA-207ENST00000545284 NTF3P20783 257 aa4.25□□□□□ -1.73
COPA-207ENST00000545284 MALP21145 153 aa4.25□□□□□ -1.73
COPA-207ENST00000545284 ATP6V0CP27449 155 aa4.25□□□□□ -1.73
COPA-207ENST00000545284 TMEM101Q96IK0 257 aa4.25□□□□□ -1.73
COPA-207ENST00000545284 C1orf196B1AJZ1 125 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 F2Z2F3 143 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 BCL2L11O43521 198 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 MGPP08493 103 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 TRGC1P0CF51 173 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 LINC00173Q6ZV60 143 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
COPA-207ENST00000545284 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
COPA-207ENST00000545284 A0A087X002 238 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 MUC21A0A140T8X8 626 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 G3V3Q6 166 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 COX7A2LO14548 114 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 NUPR1O60356 82 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 SIX6O95475 246 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 APCSP02743 223 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 UBE2BP63146 152 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 STOML3Q8TAV4 291 aa4.23□□□□□ -1.73
COPA-207ENST00000545284 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
COPA-207ENST00000545284 IGLC6P0CF74 106 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 H2BFSP57053 126 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
COPA-207ENST00000545284 UBE2G2P60604 165 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 SSTP61278 116 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 TEX261Q6UWH6 196 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 Q6ZNX1 250 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 MRPL52Q86TS9 123 aaKnown RBP4.22□□□□□ -1.73
COPA-207ENST00000545284 OR2D3Q8NGH3 330 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 OR10D4PQ8NGN7 298 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 CDC42SE2Q9NRR3 84 aa4.22□□□□□ -1.73
COPA-207ENST00000545284 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms