RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 HIGD1BQ9P298 99 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
CHFR-224ENST00000545046 COTL1Q14019 142 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
CHFR-224ENST00000545046 OVOL2Q9BRP0 275 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 K7EQD1 137 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 VCX2Q9H322 139 aa11.92□□□□□ -0.5
CHFR-224ENST00000545046 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 TRGV2A0A075B6R0 118 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 E9PLD3 99 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 GAGE7O76087 117 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 EMP1P54849 157 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 HERVK_113P61574 105 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 CIDEAO60543 219 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 SEC11AP67812 179 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
CHFR-224ENST00000545046 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
CHFR-224ENST00000545046 CHCHD7Q9BUK0 85 aa11.91□□□□□ -0.5
CHFR-224ENST00000545046 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
CHFR-224ENST00000545046 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
CHFR-224ENST00000545046 NOTCH3Q9UM47 2321 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 NPSP0C0P6 89 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 CRYBA4P53673 196 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 TMEM170BQ5T4T1 132 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 PRADC1Q9BSG0 188 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
CHFR-224ENST00000545046 FLNBO75369 2602 aaKnown RBP11.88□□□□□ -0.51
CHFR-224ENST00000545046 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
CHFR-224ENST00000545046 SLC25A29Q8N8R3 303 aa11.88□□□□□ -0.51
CHFR-224ENST00000545046 SPANXA1Q9NS26 97 aa11.88□□□□□ -0.51
CHFR-224ENST00000545046 COX11Q9Y6N1 276 aa11.88□□□□□ -0.51
CHFR-224ENST00000545046 MYMXA0A1B0GTQ4 84 aa11.88□□□□□ -0.51
CHFR-224ENST00000545046 A6NDN8 102 aa11.87□□□□□ -0.51
CHFR-224ENST00000545046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
CHFR-224ENST00000545046 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
CHFR-224ENST00000545046 DAZ4Q86SG3 579 aaKnown RBP11.86□□□□□ -0.51
CHFR-224ENST00000545046 DAZ3Q9NR90 486 aaKnown RBP11.86□□□□□ -0.51
CHFR-224ENST00000545046 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
CHFR-224ENST00000545046 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
CHFR-224ENST00000545046 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
CHFR-224ENST00000545046 AMELXQ99217 191 aa11.86□□□□□ -0.51
CHFR-224ENST00000545046 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
CHFR-224ENST00000545046 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 Q6ZVH6 145 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 TENM1Q9UKZ4 2725 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 GAGE1Q13065 139 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 GAGE4Q13068 117 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 GAGE5Q13069 117 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
CHFR-224ENST00000545046 VWFP04275 2813 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 TRBV6-4A0A1B0GX49 114 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 UBE2D3P61077 147 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 UBE2D2P62837 147 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 A0A0J9YXV3 536 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 GCSHP23434 173 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 TAL2Q16559 108 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
CHFR-224ENST00000545046 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
CHFR-224ENST00000545046 APOC4P55056 127 aa11.83□□□□□ -0.52
CHFR-224ENST00000545046 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
CHFR-224ENST00000545046 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
CHFR-224ENST00000545046 F8P00451 2351 aa11.82□□□□□ -0.52
CHFR-224ENST00000545046 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
CHFR-224ENST00000545046 X6R8D5 127 aa11.82□□□□□ -0.52
CHFR-224ENST00000545046 ATRQ13535 2644 aa11.82□□□□□ -0.52
CHFR-224ENST00000545046 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
CHFR-224ENST00000545046 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
CHFR-224ENST00000545046 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
CHFR-224ENST00000545046 CEND1Q8N111 149 aa11.81□□□□□ -0.52
CHFR-224ENST00000545046 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
CHFR-224ENST00000545046 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
CHFR-224ENST00000545046 FHL2Q14192 279 aa11.81□□□□□ -0.52
CHFR-224ENST00000545046 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
CHFR-224ENST00000545046 WIPF1O43516 503 aa11.8□□□□□ -0.52
CHFR-224ENST00000545046 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
CHFR-224ENST00000545046 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
CHFR-224ENST00000545046 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
CHFR-224ENST00000545046 SMAGPQ0VAQ4 97 aa11.8□□□□□ -0.52
CHFR-224ENST00000545046 H3BRM9 83 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 LEPROTO15243 131 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 Q6ZUT4 128 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
CHFR-224ENST00000545046 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
CHFR-224ENST00000545046 J3QQQ9 107 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms