RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 H3BNG1 76 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 M0QY20 66 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 PMCHP20382 165 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 C14orf178Q8N769 122 aaPredicted RBP4.63□□□□□ -1.67
CDCA3-209ENST00000544610 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 CHCHD1Q96BP2 118 aaKnown RBP4.63□□□□□ -1.67
CDCA3-209ENST00000544610 PRELID3AQ96N28 172 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 NOP10Q9NPE3 64 aaKnown RBP4.63□□□□□ -1.67
CDCA3-209ENST00000544610 NIT2Q9NQR4 276 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 LRP1BQ9NZR2 4599 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 NACAE9PAV3 2078 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 TRGV2A0A075B6R0 118 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 TRBV27A0A0K0K1C4 114 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 D6R8Y8 96 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 RTL8CO15255 209 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 S100A6P06703 90 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 GATA1P15976 413 aaPredicted RBP4.62□□□□□ -1.67
CDCA3-209ENST00000544610 SRIP30626 198 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 TMEM97Q5BJF2 176 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 Q6ZTI0 123 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 NRACQ8N912 160 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.62□□□□□ -1.67
CDCA3-209ENST00000544610 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
CDCA3-209ENST00000544610 TRAV26-1A0A087WT03 109 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 MUC21A0A0G2JKD1 596 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 MUC21A0A140T8X8 626 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 C5orf52A6NGY3 159 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 VCYO14598 125 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 NCR2O95944 276 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 ATP5G1P05496 136 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 NPSP0C0P6 89 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 P0DMU3 169 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 FAM231AP0DMU4 169 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 FAM231CP0DMU5 169 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 POLR2KP53803 58 aaKnown RBP4.61□□□□□ -1.67
CDCA3-209ENST00000544610 RHOHQ15669 191 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 C12orf74Q32Q52 190 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 FAM222AQ5U5X8 452 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
CDCA3-209ENST00000544610 PRADC1Q9BSG0 188 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 MAP1LC3AQ9H492 121 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
CDCA3-209ENST00000544610 MRPL16Q9NX20 251 aaKnown RBP4.61□□□□□ -1.67
CDCA3-209ENST00000544610 PRO0255Q9UI72 69 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
CDCA3-209ENST00000544610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.61□□□□□ -1.67
CDCA3-209ENST00000544610 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
CDCA3-209ENST00000544610 TRBV7-3A0A075B6L6 115 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 DEFB131BA0A096LNP1 70 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 LINC00614P0C842 121 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 HOXA5P20719 270 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 DAD1P61803 113 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
CDCA3-209ENST00000544610 ZNF56Q15929 161 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 ORMDL2Q53FV1 153 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 SUMO4Q6EEV6 95 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 BAGE3Q86Y29 109 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 Q8N8P6 123 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
CDCA3-209ENST00000544610 KIR2DL4Q99706 377 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 SMIM2Q9BVW6 85 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 SAMD10Q9BYL1 202 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 ST20Q9HBF5 79 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
CDCA3-209ENST00000544610 IGLV2-18A0A075B6J9 118 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 TRGV4A0A0C4DH28 118 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE12BA1L429 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 K7EQD1 137 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE7O76087 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 NPYP01303 97 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 PRM2P04554 102 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 MGPP08493 103 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE12FP0CL80 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE12GP0CL81 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GAGE12IP0CL82 117 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 AKR1D1P51857 326 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 SMAGPQ0VAQ4 97 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 FHL2Q14192 279 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 SERTAD4-AS1Q5TG53 156 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 FAM74A4Q5TZK3 123 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 PET117Q6UWS5 81 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 TMEM70Q9BUB7 260 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 GTSF1LQ9H1H1 148 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 JPT2Q9H910 190 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 HHLA3Q9XRX5 114 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
CDCA3-209ENST00000544610 SDHAF1A6NFY7 115 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 H7C423 109 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 I3L3M4 83 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 M0R2N4 97 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 LINC00694P0DN24 101 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 CRYBA4P53673 196 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms