RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 GAGE12JA6NER3 117 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 ATP5LO75964 103 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 GAGE1Q13065 139 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 GAGE4Q13068 117 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 GAGE5Q13069 117 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 GAGE13Q4V321 117 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 UQCR10Q9UDW1 63 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 CYSLTR1Q9Y271 337 aa9.74□□□□□ -0.85
HCFC2-202ENST00000544223 IGIPA6NJ69 53 aa9.73□□□□□ -0.85
HCFC2-202ENST00000544223 G3V4G9 280 aa9.73□□□□□ -0.85
HCFC2-202ENST00000544223 IGKCP01834 107 aa9.73□□□□□ -0.85
HCFC2-202ENST00000544223 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
HCFC2-202ENST00000544223 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
HCFC2-202ENST00000544223 ERASQ7Z444 233 aa9.73□□□□□ -0.85
HCFC2-202ENST00000544223 A0A087WX48 190 aa9.72□□□□□ -0.85
HCFC2-202ENST00000544223 H7C1H1 209 aa9.72□□□□□ -0.85
HCFC2-202ENST00000544223 DAZ2Q13117 558 aaKnown RBP9.72□□□□□ -0.85
HCFC2-202ENST00000544223 RETNQ9HD89 108 aa9.72□□□□□ -0.85
HCFC2-202ENST00000544223 M0R143 59 aa9.72□□□□□ -0.85
HCFC2-202ENST00000544223 HINT1P49773 126 aaPredicted RBP9.72□□□□□ -0.85
HCFC2-202ENST00000544223 OR11H2Q8NH07 326 aa9.72□□□□□ -0.85
HCFC2-202ENST00000544223 COL7A1Q02388 2944 aa9.71□□□□□ -0.85
HCFC2-202ENST00000544223 C20orf203Q8NBC4 194 aa9.71□□□□□ -0.85
HCFC2-202ENST00000544223 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.85
HCFC2-202ENST00000544223 DPM2O94777 84 aa9.71□□□□□ -0.86
HCFC2-202ENST00000544223 ZMAT4Q9H898 229 aa9.71□□□□□ -0.86
HCFC2-202ENST00000544223 TRAV4A0A0B4J268 109 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 RHODO00212 210 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
HCFC2-202ENST00000544223 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 A0A096LPF7 62 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 K7EQD1 137 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
HCFC2-202ENST00000544223 PTH2Q96A98 100 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
HCFC2-202ENST00000544223 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
HCFC2-202ENST00000544223 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
HCFC2-202ENST00000544223 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 PIK3CD-AS1Q5SR53 167 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 Q6ZVH6 145 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 IGHV4-28A0A0C4DH34 117 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 K7EMI3 77 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 FGF6P10767 208 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
HCFC2-202ENST00000544223 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 F8VRH5 84 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 FHL2Q14192 279 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 COX8AP10176 69 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 MAPKAPK5-AS1Q8N8E1 139 aa9.67□□□□□ -0.86
HCFC2-202ENST00000544223 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
HCFC2-202ENST00000544223 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
HCFC2-202ENST00000544223 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
HCFC2-202ENST00000544223 A0A0J9YY99 117 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 COTL1Q14019 142 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 RHOHQ15669 191 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 LYSTQ99698 3801 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 APOC4P55056 127 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 PMVKQ15126 192 aa9.65□□□□□ -0.86
HCFC2-202ENST00000544223 HTN3P15516 51 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
HCFC2-202ENST00000544223 Q6ZUT4 128 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
HCFC2-202ENST00000544223 MDFIQ99750 246 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 WIPF1O43516 503 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 G0S2P27469 103 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
HCFC2-202ENST00000544223 UBE2D3P61077 147 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 UBE2D2P62837 147 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 UBE2D4Q9Y2X8 147 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 PLNP26678 52 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 Q8NAQ8 132 aa9.63□□□□□ -0.87
HCFC2-202ENST00000544223 ZNF25P17030 456 aaPredicted RBP9.62□□□□□ -0.87
HCFC2-202ENST00000544223 VCX2Q9H322 139 aa9.62□□□□□ -0.87
HCFC2-202ENST00000544223 DNHD1Q96M86 4753 aa9.62□□□□□ -0.87
HCFC2-202ENST00000544223 BOD1L2Q8IYS8 172 aa9.62□□□□□ -0.87
HCFC2-202ENST00000544223 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
HCFC2-202ENST00000544223 K7EP13 123 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 C21orf62-AS1Q17RA5 79 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 DNAJC30Q96LL9 226 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 GYPEP15421 78 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
HCFC2-202ENST00000544223 A8MZ25 164 aa9.6□□□□□ -0.87
HCFC2-202ENST00000544223 TSPEAR-AS2P59090 65 aa9.6□□□□□ -0.87
HCFC2-202ENST00000544223 MRPS16Q9Y3D3 137 aaKnown RBP9.6□□□□□ -0.87
HCFC2-202ENST00000544223 IGKV3OR2-268A0A0C4DH90 116 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms