RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 LINC00614P0C842 121 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 UBE2D3P61077 147 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 UBE2D2P62837 147 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 IQCJQ1A5X6 159 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 HSPG2P98160 4391 aa8.6□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 FAT2Q9NYQ8 4349 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 P0DMU3 169 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 FAM231AP0DMU4 169 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 FAM231CP0DMU5 169 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 HTN3P15516 51 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 G0S2P27469 103 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 IFI27P40305 119 aaPredicted RBP8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 NDUFA6P56556 154 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 ORMDL2Q53FV1 153 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 NIT1Q86X76 327 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 VSIG2Q96IQ7 327 aa8.59□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 HSBP1O75506 76 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 SERF1AO75920 110 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GYPEP15421 78 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GAGE1Q13065 139 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GAGE4Q13068 117 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GAGE5Q13069 117 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GAGE13Q4V321 117 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 LINC00310P59036 64 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 COTL1Q14019 142 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 LAGE3Q14657 143 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 DNAH2Q9P225 4427 aa8.56□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 LY6G6CO95867 125 aa8.56□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 FCER1GP30273 86 aa8.56□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TIRAPP58753 221 aa8.56□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 Q9UF83 564 aa8.56□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 A0A0J9YY99 117 aa8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TSHBP01222 138 aa8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 HBDP02042 147 aa8.54□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 SNRPEP62304 92 aaKnown RBP8.54□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 A0A096LPF7 62 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 IGHV1-24A0A0C4DH33 117 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 H7C423 109 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 S100A2P29034 98 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 AMTP48728 403 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TCTAP57738 103 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
CACNA1C-IT3-201ENST00000542680 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 NUPR1O60356 82 aa8.52□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 NUDT3O95989 172 aa8.52□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 NPSP0C0P6 89 aa8.52□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 CYSLTR1Q9Y271 337 aa8.52□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PKD1P98161 4303 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 A0A096LNJ9 63 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PKIAP61925 76 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TMEM243Q9BU79 118 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 ATP5LO75964 103 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 LELP1Q5T871 98 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TIMM17AQ99595 171 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 LCE2BO14633 110 aa8.48□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 LYPD5Q6UWN5 251 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms