RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 DAND5Q8N907 189 aa10.96□□□□□ -0.65
AC005840.4-201ENST00000541242 C20orf203Q8NBC4 194 aa10.96□□□□□ -0.65
AC005840.4-201ENST00000541242 TIMM21Q9BVV7 248 aa10.96□□□□□ -0.65
AC005840.4-201ENST00000541242 ZNF462Q96JM2 2506 aa10.96□□□□□ -0.65
AC005840.4-201ENST00000541242 NSUN5P1Q3KNT7 163 aa10.96□□□□□ -0.66
AC005840.4-201ENST00000541242 TRBV6-5A0A0K0K1A5 114 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 KLLNB2CW77 178 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 I3L3M4 83 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 CCL19Q99731 98 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 CSMD2Q7Z408 3487 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
AC005840.4-201ENST00000541242 A0A0J9YX75 114 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 LINC01587Q99440 93 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 H3BT86 120 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
AC005840.4-201ENST00000541242 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 FAM236AA0A1B0GUQ0 79 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 FAM236BA0A1B0GV22 79 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 IGHV4-38-2P0DP08 117 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 NDUFA4O00483 81 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 COX6CP09669 75 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 RHOHQ15669 191 aa10.93□□□□□ -0.66
AC005840.4-201ENST00000541242 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 LST1O00453 97 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 CD28P10747 220 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 ATP5J2P56134 94 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 NRGNQ92686 78 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
AC005840.4-201ENST00000541242 DOPEY2Q9Y3R5 2298 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 C19orf54Q5BKX5 351 aa10.91□□□□□ -0.66
AC005840.4-201ENST00000541242 PROK1P58294 105 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 LY6EQ16553 131 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 MIAQ16674 131 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 C9orf85Q96MD7 179 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 CHD6Q8TD26 2715 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 NACAE9PAV3 2078 aa10.9□□□□□ -0.66
AC005840.4-201ENST00000541242 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.67
AC005840.4-201ENST00000541242 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.67
AC005840.4-201ENST00000541242 TMEM61Q8N0U2 210 aa10.9□□□□□ -0.67
AC005840.4-201ENST00000541242 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.67
AC005840.4-201ENST00000541242 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 Q9UF83 564 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 FAM240AA0A1B0GVK7 77 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 DEFB121Q5J5C9 76 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 TMEM126AQ9H061 195 aa10.89□□□□□ -0.67
AC005840.4-201ENST00000541242 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
AC005840.4-201ENST00000541242 KMT2BQ9UMN6 2715 aaPredicted RBP10.88□□□□□ -0.67
AC005840.4-201ENST00000541242 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 PF4V1P10720 104 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 FBN2P35556 2912 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 AVPP01185 164 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 LINC00694P0DN24 101 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 FAM208BQ5VWN6 2430 aa10.87□□□□□ -0.67
AC005840.4-201ENST00000541242 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 VSIG2Q96IQ7 327 aa10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 H3BUX3 64 aa10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 HTN1P15515 57 aa10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 CITED2Q99967 270 aaPredicted RBP10.86□□□□□ -0.67
AC005840.4-201ENST00000541242 MSMBP08118 114 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 DCANP1Q8TF63 244 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 CENPEQ02224 2701 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 LOC107984640A0A0U1RRK4 108 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 BLCAPP62952 87 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 POLQO75417 2590 aa10.85□□□□□ -0.67
AC005840.4-201ENST00000541242 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 A6NDX4 124 aa10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 IGHG2P01859 326 aa10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 PRM2P04554 102 aa10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 C9orf153Q5TBE3 101 aa10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 USP9YO00507 2555 aaPredicted RBP10.84□□□□□ -0.67
AC005840.4-201ENST00000541242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
AC005840.4-201ENST00000541242 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
AC005840.4-201ENST00000541242 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
AC005840.4-201ENST00000541242 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
AC005840.4-201ENST00000541242 Q8N2B8 174 aa10.82□□□□□ -0.68
AC005840.4-201ENST00000541242 UBR5O95071 2799 aaPredicted RBP10.81□□□□□ -0.68
AC005840.4-201ENST00000541242 DNAJC30Q96LL9 226 aa10.81□□□□□ -0.68
AC005840.4-201ENST00000541242 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
AC005840.4-201ENST00000541242 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
AC005840.4-201ENST00000541242 LRRK2Q5S007 2527 aa10.81□□□□□ -0.68
AC005840.4-201ENST00000541242 IGHV3-38A0A0C4DH36 116 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms